RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 HOXA1P49639 335 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-204ENST00000377349 HSPE1P61604 102 aaKnown RBP14.26□□□□□ -0.13
CBWD3-204ENST00000377349 IL18Q14116 193 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 STEAP1BQ6NZ63 245 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 LHFPL1Q86WI0 220 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 OR2C3Q8N628 320 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 TMEM229BQ8NBD8 167 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 ZFAND1Q8TCF1 268 aa14.26□□□□□ -0.13
CBWD3-204ENST00000377349 NOL3O60936 208 aaKnown RBP14.25□□□□□ -0.13
CBWD3-204ENST00000377349 ATG12O94817 140 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 IGKV1-5P01602 117 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 ADMP35318 185 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 SNCAP37840 140 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 ALDH3B2P48448 385 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 MFAP4P55083 255 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 RND3P61587 244 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 EWSR1Q01844 656 aaKnown RBP eCLIP14.25□□□□□ -0.13
CBWD3-204ENST00000377349 LAMTOR1Q6IAA8 161 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 CADM3Q8N126 398 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 C6orf62Q9GZU0 229 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-204ENST00000377349 C14orf166Q9Y224 244 aaKnown RBP14.25□□□□□ -0.13
CBWD3-204ENST00000377349 HERC2O95714 4834 aa14.25□□□□□ -0.13
CBWD3-204ENST00000377349 VPS13DQ5THJ4 4388 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 IGKV3-7A0A075B6H7 116 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 TRAV25A0A0B4J276 109 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 F8W735 103 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-204ENST00000377349 GABARAPH6UMI1 98 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 GNG7O60262 68 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 RELQ04864 619 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-204ENST00000377349 TERB2Q8NHR7 220 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 RRNAD1Q96FB5 475 aaKnown RBP14.24□□□□□ -0.13
CBWD3-204ENST00000377349 DIRAS2Q96HU8 199 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 C5orf66Q9H5L9 145 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 ENY2Q9NPA8 101 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 DNAH6Q9C0G6 4158 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 IGHV3OR16-13A0A075B7E8 117 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 LOC102724200A0A096LPH7 203 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-204ENST00000377349 IGHV3-74A0A0B4J1X5 117 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 TEX13DA0A0J9YY54 714 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-204ENST00000377349 ST8SIA3O43173 380 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 TFPI2P48307 235 aa14.24□□□□□ -0.13
CBWD3-204ENST00000377349 SPAG8Q99932 426 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-204ENST00000377349 DISC1C4P0D8 188 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 I3L2K1 104 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 CD74P04233 296 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 CTSGP08311 255 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 ETV6P41212 452 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 MEF2DQ14814 521 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 RAB2BQ8WUD1 216 aa14.23□□□□□ -0.13
CBWD3-204ENST00000377349 CTSDP07339 412 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-204ENST00000377349 WFDC3Q8IUB2 231 aa14.22□□□□□ -0.13
CBWD3-204ENST00000377349 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
CBWD3-204ENST00000377349 A0A0B4J293 547 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 A0A0J9YWU9 116 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 OR4C46A6NHA9 309 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 C15orf62A8K5M9 175 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 TSPAN4O14817 238 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 OR5AC1P0C628 307 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 MRPS10P82664 201 aaKnown RBP14.21□□□□□ -0.13
CBWD3-204ENST00000377349 TMEM116Q8NCL8 245 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 SMIM4Q8WVI0 70 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 ATP6V0BQ99437 205 aa14.21□□□□□ -0.13
CBWD3-204ENST00000377349 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
CBWD3-204ENST00000377349 AKAIN1P0CW23 69 aa14.2□□□□□ -0.14
CBWD3-204ENST00000377349 RPL35AP18077 110 aaKnown RBP14.2□□□□□ -0.14
CBWD3-204ENST00000377349 DUSP18Q8NEJ0 188 aa14.2□□□□□ -0.14
CBWD3-204ENST00000377349 OR4C16Q8NGL9 310 aa14.2□□□□□ -0.14
CBWD3-204ENST00000377349 RNF2Q99496 336 aa14.2□□□□□ -0.14
CBWD3-204ENST00000377349 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
CBWD3-204ENST00000377349 CCDC59Q9P031 241 aaKnown RBP14.2□□□□□ -0.14
CBWD3-204ENST00000377349 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 K7EMT4 169 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 NXPH3O95157 252 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 SUB1P53999 127 aaKnown RBP eCLIP14.19□□□□□ -0.14
CBWD3-204ENST00000377349 SSBP1Q04837 148 aaKnown RBP14.19□□□□□ -0.14
CBWD3-204ENST00000377349 TNFRSF9Q07011 255 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 PMS2P11Q13670 270 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 GBGT1Q8N5D6 347 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 DYNC2LI1Q8TCX1 351 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 TXN2Q99757 166 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 NXF2Q9GZY0 626 aaKnown RBP14.19□□□□□ -0.14
CBWD3-204ENST00000377349 NAA60Q9H7X0 242 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 MCUBQ9NWR8 336 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 SMPXQ9UHP9 88 aa14.19□□□□□ -0.14
CBWD3-204ENST00000377349 TRAV14DV4A0A0A6YYC5 116 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 IGHV3-66A0A0C4DH42 116 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 UCP1P25874 307 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 OPRK1P41145 380 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 NPBWR1P48145 328 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 ODF3L2Q3SX64 289 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 LYG2Q86SG7 212 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 OR51S1Q8NGJ8 323 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 GINS3Q9BRX5 216 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 HECTD4Q9Y4D8 3996 aa14.18□□□□□ -0.14
CBWD3-204ENST00000377349 CXorf65A6NEN9 183 aa14.17□□□□□ -0.14
CBWD3-204ENST00000377349 LY6G6CO95867 125 aa14.17□□□□□ -0.14
CBWD3-204ENST00000377349 P0C879 139 aa14.17□□□□□ -0.14
CBWD3-204ENST00000377349 APOC4P55056 127 aa14.17□□□□□ -0.14
CBWD3-204ENST00000377349 TMBIM6P55061 237 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms