RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 H0Y8G0 127 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 DEDDO75618 318 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 RELQ04864 619 aaPredicted RBP6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 ELOVL1Q9BW60 279 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 DNAJC4Q9NNZ3 241 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 SMCO4Q9NRQ5 59 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 TMEM167BQ9NRX6 74 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 CTSZQ9UBR2 303 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 NACAE9PAV3 2078 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 A0A1W2PPQ1 181 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 LINC00473A8K010 186 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 GATA3P23771 443 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 GNG4P50150 75 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 NDUFA6P56556 154 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 DAZAP2Q15038 168 aaPredicted RBP6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 SLC25A48Q6ZT89 311 aaKnown RBP6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 ZNF383Q8NA42 475 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 TAF15Q92804 592 aaKnown RBP eCLIP6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 CXorf58Q96LI9 332 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 TOLLIPQ9H0E2 274 aa6.92□□□□□ -1.3
CRNKL1-202ENST00000377340 CHD3Q12873 2000 aaKnown RBP6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 TRAV30A0A087WSZ9 112 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 TRAV3A0A0B4J244 114 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 C11orf94C9JXX5 98 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 FAM90A26D6RGX4 464 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 LDLRAD4O15165 306 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 OR9G9P0C7N8 305 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 UBE2E1P51965 193 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 C5orf64Q2M2E5 130 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 GALNT14Q96FL9 552 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 CHRDL1Q9BU40 450 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 SETXQ7Z333 2677 aaKnown RBP6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 PGPA6NDG6 321 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 HMSDA8MTL9 139 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 ZNF705GA8MUZ8 300 aaPredicted RBP6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 CTRB1P17538 263 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 DLX6P56179 175 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 FBXL19-AS1Q494R0 122 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 TMEM41BQ5BJD5 291 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 CTRB2Q6GPI1 263 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 TEX261Q6UWH6 196 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 LCNL1Q6ZST4 164 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 OR51G1Q8NGK1 321 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 Q8TCH9 128 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 RNF2Q99496 336 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 SAMD10Q9BYL1 202 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 IFI27L2Q9H2X8 130 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 CD55P08174 381 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 HIST1H1BP16401 226 aaKnown RBP6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 C15orf32Q32M92 178 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 WFDC11Q8NEX6 87 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 USP24Q9UPU5 2620 aa6.91□□□□□ -1.3
CRNKL1-202ENST00000377340 LOC102724200A0A096LPH7 203 aaPredicted RBP6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 TCL1AP56279 114 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 C2orf68Q2NKX9 166 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 PRNTQ86SH4 94 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 CHAC2Q8WUX2 184 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 NABP2Q9BQ15 211 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 UFC1Q9Y3C8 167 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 EML5Q05BV3 1969 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 IGHV2-5P01817 119 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 IGFBP2P18065 325 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 DDB2Q92466 427 aa6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 LYRM2Q9NU23 88 aaPredicted RBP6.9□□□□□ -1.3
CRNKL1-202ENST00000377340 HOXA3O43365 443 aaPredicted RBP6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 CAMPP49913 170 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 QRFPP83859 136 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 DIAPH2-AS1Q14236 149 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 PRSS8Q16651 343 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 TMEM78Q5T7P6 136 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 C1orf122Q6ZSJ8 110 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 TEX45Q8NA69 505 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 TEP1Q99973 2627 aaKnown RBP6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 RNASEK-C17orf49H0YIS7 233 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 SAP30O75446 220 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF735P0CB33 412 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 HIST1H1EP10412 219 aaKnown RBP6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 PLA2G2AP14555 144 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 RPL7P18124 248 aaKnown RBP6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 EMP1P54849 157 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 RAB5BP61020 215 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 HIST1H1AQ02539 215 aaPredicted RBP6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 HERPUD1Q15011 391 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 SIGLECL1Q8N7X8 197 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 NOL4LQ96MY1 436 aaPredicted RBP6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 TNFSF18Q9UNG2 199 aa6.9□□□□□ -1.31
CRNKL1-202ENST00000377340 FAM181BA6NEQ2 426 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF98A6NK75 572 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 G3V318 75 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 OR2C1O95371 312 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 CNTFRP26992 372 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms