RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TNFRSF19Q9NS68 423 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 F11RQ9Y624 299 aaKnown RBP8.25□□□□□ -1.09
PDPN-203ENST00000376061 HIVEP2P31629 2446 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 DFFBO76075 338 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 CFDP00746 253 aaPredicted RBP8.24□□□□□ -1.09
PDPN-203ENST00000376061 IFNA4P05014 189 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 CTRB1P17538 263 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 ZNF266Q14584 549 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 CTRB2Q6GPI1 263 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 SGMS2Q8NHU3 365 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 PINX1Q96BK5 328 aaKnown RBP8.24□□□□□ -1.09
PDPN-203ENST00000376061 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 DMRT1Q9Y5R6 373 aa8.24□□□□□ -1.09
PDPN-203ENST00000376061 BORCS7-ASMTA0A0B4J1R7 106 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 UBE2L5PA0A1B0GUS4 154 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 DNAJC9-AS1A6NH13 148 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 NPIPB5A8MRT5 1133 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 FBXO24O75426 580 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 JTBO76095 146 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 TPT1P13693 172 aaKnown RBP8.23□□□□□ -1.09
PDPN-203ENST00000376061 CRIP2P52943 208 aaPredicted RBP8.23□□□□□ -1.09
PDPN-203ENST00000376061 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDPN-203ENST00000376061 BLCAPP62952 87 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 DLK1P80370 383 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 ECSCRQ19T08 205 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 VWC2Q2TAL6 325 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 C9orf152Q5JTZ5 239 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 TEX261Q6UWH6 196 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 TMEM86BQ8N661 226 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 UBAC2Q8NBM4 344 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 LFNGQ8NES3 379 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 DUX5Q96PT3 197 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 ARV1Q9H2C2 271 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 UQCC1Q9NVA1 299 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 CDC42EP3Q9UKI2 254 aa8.23□□□□□ -1.09
PDPN-203ENST00000376061 IGHG2P01859 326 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 CRYGCP07315 174 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 SRD5A1P18405 259 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 SCGB2A2Q13296 93 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 ATP6V1FQ16864 119 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 C19orf54Q5BKX5 351 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 Q6ZS46 218 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 SLC35E3Q7Z769 313 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 BAP18Q8IXM2 172 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 RNASEH2CQ8TDP1 164 aaKnown RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 MISP3Q96FF7 219 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 GGACTQ9BVM4 153 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 WNT10AQ9GZT5 417 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 GSX1Q9H4S2 264 aaPredicted RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 F8P00451 2351 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 G3V318 75 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 RGS13O14921 159 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 IFNA5P01569 189 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 IGF1P05019 195 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 RPLP1P05386 114 aaKnown RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 EIF5AP63241 154 aaKnown RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 RUNX1Q01196 453 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 CD69Q07108 199 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 EXOSC2Q13868 293 aaKnown RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 UNQ5815/PRO19632Q6UWF5 114 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 ALKAL2Q6UX46 152 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 RBMS3Q6XE24 437 aaKnown RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 Q71RC1 249 aaPredicted RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 TTC9CQ8N5M4 171 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 HSD17B11Q8NBQ5 300 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 ZNF680Q8NEM1 530 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 FAM110DQ8TAY7 271 aaPredicted RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 GINS3Q9BRX5 216 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 PARD6GQ9BYG4 376 aaPredicted RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 SH3BGRL3Q9H299 93 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 FNDC4Q9H6D8 234 aaPredicted RBP8.22□□□□□ -1.09
PDPN-203ENST00000376061 ESM1Q9NQ30 184 aa8.22□□□□□ -1.09
PDPN-203ENST00000376061 IGLV11-55A0A075B6I3 123 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 TRAV41A0A0B4J266 112 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 SMCO3A2RU48 225 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 INAFM1C9JVW0 142 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 CORTO00230 105 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 PRH1P02810 166 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 DEFA4P12838 97 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 MDKP21741 143 aaPredicted RBP8.21□□□□□ -1.1
PDPN-203ENST00000376061 FGF7P21781 194 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 ATP6V0CP27449 155 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 GPX4P36969 197 aaPredicted RBP8.21□□□□□ -1.1
PDPN-203ENST00000376061 OPRK1P41145 380 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 AKIRIN2Q53H80 203 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 SLC25A24Q6NUK1 477 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 OR5T1Q8NG75 326 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 OR1L6Q8NGR2 347 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 PHYHIPLQ96FC7 376 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 NPFFR1Q9GZQ6 430 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 WDR61Q9GZS3 305 aaKnown RBP8.21□□□□□ -1.1
PDPN-203ENST00000376061 ZNF702PQ9H963 129 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms