RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 TEX22C9J3V5 150 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 IFNA1P01562 189 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 SAA4P35542 130 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 KHDC3LQ587J8 217 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 TMPRSS5Q9H3S3 457 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 FAM208BQ5VWN6 2430 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 IGKV1OR2-108A0A075B7D4 117 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 NDUFA3O95167 84 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 CNIH1O95406 144 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 HSPB1P04792 205 aaKnown RBP13.48□□□□□ -0.25
PTPN20-203ENST00000374342 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
PTPN20-203ENST00000374342 FBP1P09467 338 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 ZNF114Q8NC26 417 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 NPBQ8NG41 125 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 OR2T6Q8NHC8 308 aa13.48□□□□□ -0.25
PTPN20-203ENST00000374342 FNDC4Q9H6D8 234 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-203ENST00000374342 LRRK2Q5S007 2527 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 A0A1W2PPV4 95 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 OR10J1P30954 320 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-203ENST00000374342 RPL29P47914 159 aaKnown RBP13.47□□□□□ -0.25
PTPN20-203ENST00000374342 CRYBG3Q68DQ2 2970 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 CYB561D1Q8N8Q1 229 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 ABHD5Q8WTS1 349 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 CACNG8Q8WXS5 425 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 MISP3Q96FF7 219 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 NUPL2O15504 423 aaKnown RBP13.47□□□□□ -0.25
PTPN20-203ENST00000374342 IGHV3-48P01763 117 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 MFAP2P55001 183 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 SOHLH1Q5JUK2 328 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 SUN5Q8TC36 379 aa13.47□□□□□ -0.25
PTPN20-203ENST00000374342 FAM74A7A6NL05 159 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 NPFFO15130 113 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 TMEM11P17152 192 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 COL8A1P27658 744 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 PRR20EP86478 221 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 PRR20CP86479 221 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 PRR20DP86480 221 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 PRR20BP86481 221 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 PRR20AP86496 221 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 FAM74A3Q4VXF1 159 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 AKIRIN2Q53H80 203 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 MALSU1Q96EH3 234 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 SLC45A2Q9UMX9 530 aa13.46□□□□□ -0.25
PTPN20-203ENST00000374342 NCBP2LA6PVI3 153 aaKnown RBP13.45□□□□□ -0.26
PTPN20-203ENST00000374342 PAX8Q06710 450 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 Q8N6K4 173 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 CLRN3Q8NCR9 226 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 AJUBAQ96IF1 538 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 IGHV3OR16-10A0A075B7F0 116 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 CENPVL3A0A0U1RRI6 287 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 DSCR9P59020 149 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 GATAD1Q8WUU5 269 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 MANBALQ9NQG1 85 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 VAX2Q9UIW0 290 aa13.45□□□□□ -0.26
PTPN20-203ENST00000374342 F11RQ9Y624 299 aaKnown RBP13.45□□□□□ -0.26
PTPN20-203ENST00000374342 DNASE2O00115 360 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-203ENST00000374342 LINC00869P0C866 280 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 PAX1P15863 534 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 GATA2P23769 480 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-203ENST00000374342 RND2P52198 227 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 RHOBP62745 196 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 FXYD3Q14802 87 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 FAM120AOSQ5T036 256 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 RUSC1-AS1Q66K80 236 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 RBMS3Q6XE24 437 aaKnown RBP13.44□□□□□ -0.26
PTPN20-203ENST00000374342 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 NPIPB3Q92617 1050 aa13.44□□□□□ -0.26
PTPN20-203ENST00000374342 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
PTPN20-203ENST00000374342 TRAV40A0A0B4J280 105 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 M0R036 132 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 ARL14EPLP0DKL9 152 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 PSMB3P49720 205 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 EBI3Q14213 229 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 CLEC12BQ2HXU8 276 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 AWAT1Q58HT5 328 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 TMEM88Q6PEY1 159 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
PTPN20-203ENST00000374342 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 SPG11Q96JI7 2443 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 IGHV3-21A0A0B4J1V1 117 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 BRS3P32247 399 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 PMS2P11Q13670 270 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 ETFRF1Q6IPR1 90 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 CYP2G1PQ6ZSU1 146 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
PTPN20-203ENST00000374342 SRSF8Q9BRL6 282 aaKnown RBP13.43□□□□□ -0.26
PTPN20-203ENST00000374342 PUS1Q9Y606 427 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPN20-203ENST00000374342 CORTO00230 105 aa13.42□□□□□ -0.26
PTPN20-203ENST00000374342 MSMBP08118 114 aa13.42□□□□□ -0.26
PTPN20-203ENST00000374342 FAM106CPP0CH98 169 aa13.42□□□□□ -0.26
PTPN20-203ENST00000374342 MEF2BQ02080 365 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-203ENST00000374342 SLC35E3Q7Z769 313 aa13.42□□□□□ -0.26
PTPN20-203ENST00000374342 C22orf15Q8WYQ4 148 aa13.42□□□□□ -0.26
PTPN20-203ENST00000374342 SLC25A33Q9BSK2 321 aa13.42□□□□□ -0.26
PTPN20-203ENST00000374342 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms