RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 NABP2Q9BQ15 211 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 MSGN1A6NI15 193 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 PEX7O00628 323 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 LEPROTL1O95214 131 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 HLA-DRB1P01911 266 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 FABP2P12104 132 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 FOXA3P55318 350 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-202ENST00000372216 JOSD1Q15040 202 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-202ENST00000372216 TXNDC17Q9BRA2 123 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 CD8AP01732 235 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 IFITM3Q01628 133 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 CYB5R2Q6BCY4 276 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 CLDND2Q8NHS1 167 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 MRPL16Q9NX20 251 aaKnown RBP8.19□□□□□ -1.1
COL4A6-202ENST00000372216 ELOA3CA0A087WX78 387 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-202ENST00000372216 CGB7P0DN87 165 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 CFHR3Q02985 330 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 CCDC88CQ9P219 2028 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
COL4A6-202ENST00000372216 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 REC114Q7Z4M0 266 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 C10orf126Q8N4M7 172 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 LINC00862A6NCI5 91 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 SLC25A20O43772 301 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 APOMO95445 188 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 GNG5P63218 68 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 IL17RELQ6ZVW7 336 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 GGNQ86UU5 652 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 LRTM2Q8N967 370 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 FGFBP3Q8TAT2 258 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 SRSF4Q08170 494 aaKnown RBP8.18□□□□□ -1.1
COL4A6-202ENST00000372216 LAIR2Q6ISS4 152 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 IGHV1-46P01743 117 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 TYMSP04818 313 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 IFI27L2Q9H2X8 130 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 A0A0G2JNJ9 132 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 LYPD3O95274 346 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-202ENST00000372216 IGFBP2P18065 325 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 DSCR9P59020 149 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 HBBP68871 147 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 Q9UFV3 132 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 A0A1B0GTI1 187 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 IL18BPO95998 194 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 CLPSP04118 112 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 IL6RP08887 468 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-202ENST00000372216 RAB24Q969Q5 203 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 SIP14410 1827 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 ADARB2-AS1A8MUL3 147 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 Q5PR19 223 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 C19orf24Q9BVV8 132 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 PLSCR4Q9NRQ2 329 aa8.18□□□□□ -1.1
COL4A6-202ENST00000372216 TFF3Q07654 80 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 MSRB2Q9Y3D2 182 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 ANK1P16157 1881 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 ABCA7Q8IZY2 2146 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 NBR2O15453 112 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 TMEM133Q9H2Q1 129 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 C21orf62Q9NYP8 219 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 DOCK4Q8N1I0 1966 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 LHBP01229 141 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 MEF2BQ02080 365 aaPredicted RBP8.17□□□□□ -1.1
COL4A6-202ENST00000372216 VMO1Q7Z5L0 202 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 TMEM183AQ8IXX5 376 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 RPRMQ9NS64 109 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 NEUROG3Q9Y4Z2 214 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 CGAP01215 116 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 OR10S1Q8NGN2 331 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 H3BRM9 83 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 TRGC2P03986 189 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 OR11H4Q8NGC9 324 aa8.17□□□□□ -1.1
COL4A6-202ENST00000372216 LCNL1Q6ZST4 164 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 FNDC1Q4ZHG4 1894 aaPredicted RBP8.16□□□□□ -1.1
COL4A6-202ENST00000372216 LILRA1O75019 489 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 ATP5IP56385 69 aaPredicted RBP8.16□□□□□ -1.1
COL4A6-202ENST00000372216 S100A7L2Q5SY68 101 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 MDS2Q8NDY4 140 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 H7C1H1 209 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 IGFBP3P17936 291 aaPredicted RBP8.16□□□□□ -1.1
COL4A6-202ENST00000372216 LINC00158P58513 81 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 CKAP5Q14008 2032 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 GCHFRP30047 84 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 NDPQ00604 133 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 CENPWQ5EE01 88 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 ACTL10Q5JWF8 245 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 FAM166AQ6J272 317 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 TCF24Q7RTU0 167 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 TRAV14DV4A0A0A6YYC5 116 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 EFNA2O43921 213 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 H2BFSP57053 126 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 ZNF672Q499Z4 452 aaPredicted RBP8.16□□□□□ -1.1
COL4A6-202ENST00000372216 ZNF329Q86UD4 541 aa8.16□□□□□ -1.1
COL4A6-202ENST00000372216 NPIPB7O75200 414 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms