RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 GAMTQ14353 236 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 ETFRF1Q6IPR1 90 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 SLC16A13Q7RTY0 426 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 TMEM144Q7Z5S9 345 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 SLC35E1Q96K37 410 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 SLC25A33Q9BSK2 321 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 KCNIP2Q9NS61 270 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 PRRC2AP48634 2157 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 PDZD2O15018 2839 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 TSPAN9O75954 239 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 TMEM41BQ5BJD5 291 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 OR1L6Q8NGR2 347 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 MOB4Q9Y3A3 225 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 IL34Q6ZMJ4 242 aa20.84■□□□□ 0.93
ATPAF1-202ENST00000371937 EIF4E3Q8N5X7 224 aaKnown RBP20.84■□□□□ 0.93
ATPAF1-202ENST00000371937 MGST2Q99735 147 aa20.84■□□□□ 0.93
ATPAF1-202ENST00000371937 RPRMQ9NS64 109 aa20.84■□□□□ 0.93
ATPAF1-202ENST00000371937 SOX21Q9Y651 276 aaPredicted RBP20.84■□□□□ 0.93
ATPAF1-202ENST00000371937 ITPR2Q14571 2701 aa20.84■□□□□ 0.93
ATPAF1-202ENST00000371937 IGHV7-81A0A0B4J1V7 117 aa20.83■□□□□ 0.93
ATPAF1-202ENST00000371937 CTRB1P17538 263 aa20.83■□□□□ 0.93
ATPAF1-202ENST00000371937 ELLP55199 621 aaPredicted RBP20.83■□□□□ 0.93
ATPAF1-202ENST00000371937 CTRB2Q6GPI1 263 aa20.83■□□□□ 0.93
ATPAF1-202ENST00000371937 FAM103A1Q9BTL3 118 aaKnown RBP20.83■□□□□ 0.93
ATPAF1-202ENST00000371937 TSPAN15O95858 294 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 DEFA4P12838 97 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 MLANAQ16655 118 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 FFAR4Q5NUL3 377 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 C5orf56Q8N8D9 126 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 MISP3Q96FF7 219 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 WNT10AQ9GZT5 417 aa20.83■□□□□ 0.92
ATPAF1-202ENST00000371937 RAB19A4D1S5 217 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 FSHBP01225 129 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 H2AFB1P0C5Y9 115 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 MFAP2P55001 183 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 GGTLC1Q9BX51 225 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 FNDC4Q9H6D8 234 aaPredicted RBP20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 PITPNC1Q9UKF7 332 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 ZANQ9Y493 2812 aa20.82■□□□□ 0.92
ATPAF1-202ENST00000371937 CCDC168Q8NDH2 2452 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 H3BUX3 64 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 AGPAT2O15120 278 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 NDPQ00604 133 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 ACSM6Q6P461 480 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 TMEM219Q86XT9 240 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 VSIRQ9H7M9 311 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 NPIPB5A8MRT5 1133 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 CRYGCP07315 174 aa20.81■□□□□ 0.92
ATPAF1-202ENST00000371937 ITPR3Q14573 2671 aa20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 ACOT6Q3I5F7 207 aaPredicted RBP20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 CIARTQ8N365 385 aaPredicted RBP20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 COMMD1Q8N668 190 aa20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 OR2T6Q8NHC8 308 aa20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 CELSR1Q9NYQ6 3014 aa20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 CSMD1Q96PZ7 3565 aa20.8■□□□□ 0.92
ATPAF1-202ENST00000371937 A6NDX4 124 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 C9orf139Q6ZV77 190 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 TTC9CQ8N5M4 171 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 C22orf15Q8WYQ4 148 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 ACY3Q96HD9 319 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 ABCA1O95477 2261 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 CSPG4Q6UVK1 2322 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 HECTD1Q9ULT8 2610 aa20.79■□□□□ 0.92
ATPAF1-202ENST00000371937 CYB5BO43169 146 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 M6PRP20645 277 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 RPL29P47914 159 aaKnown RBP20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 RAB2AP61019 212 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 C19orf35Q6ZS72 473 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 LFNGQ8NES3 379 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 HSPB9Q9BQS6 159 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 PXMP4Q9Y6I8 212 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 BTBD17A6NE02 478 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 M0QZK8 103 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 HBE1P02100 147 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 ASPHD1Q5U4P2 390 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 UQCC3Q6UW78 93 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 TEX29Q8N6K0 151 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 OR10G4Q8NGN3 311 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 OR10G9Q8NGN4 311 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 OR10G7Q8NGN6 311 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 SGMS2Q8NHU3 365 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 SFT2D1Q8WV19 159 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 DMRT1Q9Y5R6 373 aa20.78■□□□□ 0.92
ATPAF1-202ENST00000371937 SMAD7O15105 426 aaKnown RBP20.77■□□□□ 0.92
ATPAF1-202ENST00000371937 EGR2P11161 476 aaPredicted RBP20.77■□□□□ 0.92
ATPAF1-202ENST00000371937 DEFB112Q30KQ8 113 aa20.77■□□□□ 0.92
ATPAF1-202ENST00000371937 C16orf82Q7Z2V1 217 aa20.77■□□□□ 0.92
ATPAF1-202ENST00000371937 RCC1LQ96I51 464 aaKnown RBP20.77■□□□□ 0.92
ATPAF1-202ENST00000371937 IGKV1OR2-108A0A075B7D4 117 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 LY6EQ16553 131 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 MIC13Q5XKP0 118 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 BCL6BQ8N143 479 aaPredicted RBP20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 RPP25LQ8N5L8 163 aaKnown RBP20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 NPIPB3Q92617 1050 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 TRAV1-1A0A0B4J248 108 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 I3L521 148 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 MT-CO2P00403 227 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 B2MP61769 119 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 MBD3L1Q8WWY6 194 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 TMEM68Q96MH6 324 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms