RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 BEND2Q8NDZ0 799 aa14.34□□□□□ -0.11
PTP4A1-201ENST00000370651 YPEL2Q96QA6 119 aa14.34□□□□□ -0.11
PTP4A1-201ENST00000370651 RFNGQ9Y644 331 aa14.34□□□□□ -0.11
PTP4A1-201ENST00000370651 ABCA7Q8IZY2 2146 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 ANK1P16157 1881 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 FOXL1Q12952 345 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 NMSQ5H8A3 153 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 TIMM23BQ5SRD1 257 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 FAM90A1Q86YD7 464 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 FOXC2Q99958 501 aa14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 MRPL20Q9BYC9 149 aaKnown RBP14.33□□□□□ -0.11
PTP4A1-201ENST00000370651 UPK2O00526 184 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 NPPCP23582 126 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 SRSF7Q16629 238 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 RPP25LQ8N5L8 163 aaKnown RBP14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 C5orf30Q96GV9 206 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 MRPS18CQ9Y3D5 142 aaKnown RBP14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 EFNA2O43921 213 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 CELA3BP08861 270 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 LYL1P12980 280 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 DYNLRB2Q8TF09 96 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 FBXL15Q9H469 300 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 IGHV1-69-2A0A0G2JMI3 117 aa14.33□□□□□ -0.12
PTP4A1-201ENST00000370651 GNG5P63218 68 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 RNFT1Q5M7Z0 435 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 QRFPP83859 136 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 PRSS8Q16651 343 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 C1orf162Q8NEQ5 155 aaPredicted RBP14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 JKAMPQ9P055 326 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 IGHV2OR16-5A0A0B4J2B6 119 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 SAA1P0DJI8 122 aaPredicted RBP14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 LINC01551Q86U37 167 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 FGF11Q92914 225 aa14.32□□□□□ -0.12
PTP4A1-201ENST00000370651 UMODP07911 640 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 OR9G9P0C7N8 305 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 KLHDC3Q9BQ90 382 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 IGKV1-27A0A075B6S5 117 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 LINC00614P0C842 121 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 MORN2Q502X0 79 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 C19orf54Q5BKX5 351 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 RTN4RL2Q86UN3 420 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 TMEM171Q8WVE6 324 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 FOXA2Q9Y261 457 aaPredicted RBP14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 STAG3L3P0CL85 134 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 IGHV1-2P23083 117 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 HGFACQ04756 655 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 IGKV3D-15A0A087WSY6 115 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 DLEU1O43261 78 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 IGKV3-15P01624 115 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 DUTP33316 252 aaKnown RBP14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 FGFBP3Q8TAT2 258 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 DERL1Q9BUN8 251 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 BEX4Q9NWD9 120 aaPredicted RBP14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 EPDR1Q9UM22 224 aa14.31□□□□□ -0.12
PTP4A1-201ENST00000370651 DOCK6Q96HP0 2047 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 FTH1P19P0C7X4 201 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 STPG1Q5TH74 334 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 RNF144BQ7Z419 303 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 PRR7Q8TB68 274 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 IGHV3OR16-13A0A075B7E8 117 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 LOC102723996A0A087X1L8 192 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 IGHV3-74A0A0B4J1X5 117 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 PYYP10082 97 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 FER1L6-AS1Q8NA97 138 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 NABP1Q96AH0 204 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 LDLRAD2Q5SZI1 272 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 TMEM170BQ5T4T1 132 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 ZIC4Q8N9L1 334 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 C2orf88Q9BSF0 95 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 OTORQ9NRC9 128 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 EMP1P54849 157 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 MEF2CQ06413 473 aaPredicted RBP14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 MST1LQ2TV78 715 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 PAPPA-AS1Q5QFB9 102 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 FAM74A4Q5TZK3 123 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 TREML4Q6UXN2 200 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 ZNF418Q8TF45 676 aaPredicted RBP14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 MESP1Q9BRJ9 268 aa14.3□□□□□ -0.12
PTP4A1-201ENST00000370651 LHX2P50458 406 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 TMEM256Q8N2U0 113 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 S4R3C0 116 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 ATP5G2Q06055 141 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 CIRBPQ14011 172 aaKnown RBP14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 LOXL4Q96JB6 756 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 RNF115Q9Y4L5 304 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 LINC00312Q9Y6C7 94 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 FAM90A9PA6NNJ1 464 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 CA1P00915 261 aaPredicted RBP14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 CD69Q07108 199 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 LURAP1LQ8IV03 231 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 GGTLC1Q9BX51 225 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 EEF1AKMT3Q96AZ1 226 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 SCGB3A1Q96QR1 104 aa14.29□□□□□ -0.12
PTP4A1-201ENST00000370651 LOC105371242A0A075B767 164 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 M0R381 172 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 ACTL10Q5JWF8 245 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 FNDC4Q9H6D8 234 aaPredicted RBP14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 SCGB1A1P11684 91 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms