RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 BEND2Q8NDZ0 799 aa13.88□□□□□ -0.19
UBE3D-203ENST00000369747 P2RX4Q99571 388 aa13.88□□□□□ -0.19
UBE3D-203ENST00000369747 GGTLC1Q9BX51 225 aa13.88□□□□□ -0.19
UBE3D-203ENST00000369747 NPVFQ9HCQ7 196 aa13.88□□□□□ -0.19
UBE3D-203ENST00000369747 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
UBE3D-203ENST00000369747 SEC14L6B5MCN3 397 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 CYB5BO43169 146 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 YIF1AO95070 293 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 GATA3P23771 443 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 PAX6P26367 422 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 IL3RAP26951 378 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 PRRX1P54821 245 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 RPL8P62917 257 aaKnown RBP13.87□□□□□ -0.19
UBE3D-203ENST00000369747 BSXQ3C1V8 233 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 CYB5R2Q6BCY4 276 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 TMEM167AQ8TBQ9 72 aa13.87□□□□□ -0.19
UBE3D-203ENST00000369747 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 CENPVL3A0A0U1RRI6 287 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 SOX15O60248 233 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 CDC34P49427 236 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-203ENST00000369747 TUBA4BQ9H853 241 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 NDUFA4L2Q9NRX3 87 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 HIVEP1P15822 2718 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 PLXNB1O43157 2135 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 NAV3Q8IVL0 2385 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 BUB1B-PAK6H3BSN5 160 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 RAB13P51153 203 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 MIC13Q5XKP0 118 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 RBMS3Q6XE24 437 aaKnown RBP13.86□□□□□ -0.19
UBE3D-203ENST00000369747 LHFPL4Q7Z7J7 247 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 C15orf54Q8N8G6 183 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 OR10W1Q8NGF6 305 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 OR4A5Q8NH83 315 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 RITA1Q96K30 269 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 PXMP4Q9Y6I8 212 aa13.86□□□□□ -0.19
UBE3D-203ENST00000369747 SONP18583 2426 aaKnown RBP13.85□□□□□ -0.19
UBE3D-203ENST00000369747 TRAV40A0A0B4J280 105 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 E7EUB6 86 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 RNASE2P10153 161 aaKnown RBP13.85□□□□□ -0.19
UBE3D-203ENST00000369747 MC5RP33032 325 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 UBE2E1P51965 193 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 C2orf83Q53S99 150 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 VSTM2AQ8TAG5 236 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 NIPSNAP3BQ9BS92 247 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 COMMD5Q9GZQ3 224 aa13.85□□□□□ -0.19
UBE3D-203ENST00000369747 FNDC10F2Z333 226 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 IGHV4-38-2P0DP08 117 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 CD81P60033 236 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 KRTAP1-1Q07627 177 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 OR1L8Q8NGR8 309 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 GATAD1Q8WUU5 269 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 ISOC2Q96AB3 205 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 TVP23CQ96ET8 276 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 ATP5IP56385 69 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-203ENST00000369747 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-203ENST00000369747 KLF17Q5JT82 389 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-203ENST00000369747 BRD3OSQ6XYD6 125 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 SLC35E3Q7Z769 313 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 SSMEM1Q8WWF3 244 aa13.84□□□□□ -0.19
UBE3D-203ENST00000369747 IGHV3-72A0A0B4J1Y9 119 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 CGB1A6NKQ9 187 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 INS-IGF2F8WCM5 200 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 LY6LH3BQJ8 138 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 CRYBA1P05813 215 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 HTR1DP28221 377 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 MRGPRG-AS1Q2M3A8 158 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 RUSC1-AS1Q66K80 236 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 HIST1H2BAQ96A08 127 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 ZNF430Q9H8G1 570 aaPredicted RBP13.83□□□□□ -0.2
UBE3D-203ENST00000369747 MANBALQ9NQG1 85 aa13.83□□□□□ -0.2
UBE3D-203ENST00000369747 J3QLI3 93 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 SLC25A17O43808 307 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 SAA4P35542 130 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 PSMB3P49720 205 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 MOB3BQ86TA1 216 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 TPSG1Q9NRR2 321 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 DPM3Q9P2X0 92 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 HILPDAQ9Y5L2 63 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 TAGLN2P37802 199 aaKnown RBP13.82□□□□□ -0.2
UBE3D-203ENST00000369747 LGALS4P56470 323 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 VMA21Q3ZAQ7 101 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 C10orf55Q5SWW7 151 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 DYNAPQ8N1N2 210 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 AJUBAQ96IF1 538 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 KCNIP2Q9NS61 270 aa13.82□□□□□ -0.2
UBE3D-203ENST00000369747 AMMECR1Q9Y4X0 333 aaPredicted RBP13.82□□□□□ -0.2
UBE3D-203ENST00000369747 IGHV1-69DA0A0B4J2H0 117 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 IGHV1-3A0A0C4DH29 117 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 A0A1W2PPV4 95 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 NPFFO15130 113 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 RPL29P47914 159 aaKnown RBP13.81□□□□□ -0.2
UBE3D-203ENST00000369747 LGALS7P47929 136 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 B2MP61769 119 aa13.81□□□□□ -0.2
UBE3D-203ENST00000369747 FLI1Q01543 452 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-203ENST00000369747 SSX2Q16385 188 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms