RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 AKR1C1Q04828 323 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 ZNF616Q08AN1 781 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 GCSAMLQ5JQS6 135 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 LSM4Q9Y4Z0 139 aaKnown RBP11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 TRAV20A0A0B4J274 112 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 LY86O95711 162 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 PRH1P02810 166 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 RAB11AP62491 216 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 DLK1P80370 383 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 CENPVQ7Z7K6 275 aaPredicted RBP11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 Q8N9W7 124 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 OR2T6Q8NHC8 308 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 SSMEM1Q8WWF3 244 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 PSMG3Q9BT73 122 aaPredicted RBP11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 PFDN2Q9UHV9 154 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 A0A1W2PN81 502 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 TGFAP01135 160 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 CHRNA7P36544 502 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 SNCAP37840 140 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 HSPB9Q9BQS6 159 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 TMEM231Q9H6L2 316 aa11.18□□□□□ -0.62
HMGCS2-201ENST00000369406 ZNF98A6NK75 572 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 MAS1LP35410 378 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 GAMTQ14353 236 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 FAM96BQ9Y3D0 163 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 ACTL6BO94805 426 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 ERHP84090 104 aaKnown RBP11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 HSD17B13Q7Z5P4 300 aaPredicted RBP11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 BCL6BQ8N143 479 aaPredicted RBP11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 SAV1Q9H4B6 383 aaPredicted RBP11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 OTOGQ6ZRI0 2925 aa11.17□□□□□ -0.62
HMGCS2-201ENST00000369406 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 C9JQL5 133 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 YIF1AO95070 293 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 EGR2P11161 476 aaPredicted RBP11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 CX3CL1P78423 397 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 CD69Q07108 199 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 FXYD3Q14802 87 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 GGTLC1Q9BX51 225 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 KIAA1456Q9P272 454 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 CNIH1O95406 144 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 AKR1C8PQ5T2L2 129 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 MIC13Q5XKP0 118 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 C22orf15Q8WYQ4 148 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 TIMM9Q9Y5J7 89 aa11.16□□□□□ -0.62
HMGCS2-201ENST00000369406 NOTCH2Q04721 2471 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 UMAD1C9J7I0 102 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 SLC16A13Q7RTY0 426 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 ZNF114Q8NC26 417 aa11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 RCC1LQ96I51 464 aaKnown RBP11.15□□□□□ -0.62
HMGCS2-201ENST00000369406 HMGB3O15347 200 aaKnown RBP11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 AMY1AP04745 511 aa11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 GATA2P23769 480 aaPredicted RBP11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 RAB5CP51148 216 aa11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 FFAR4Q5NUL3 377 aa11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 EIF4E3Q8N5X7 224 aaKnown RBP11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 BPIFCQ8NFQ6 507 aa11.15□□□□□ -0.63
HMGCS2-201ENST00000369406 FGF8P55075 233 aaPredicted RBP11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 DEFA5Q01523 94 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 BRS3P32247 399 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 PRSS57Q6UWY2 283 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 SSX3Q99909 188 aa11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
HMGCS2-201ENST00000369406 NF1P21359 2839 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 IGKV1D-37A0A075B6S9 117 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 SERF2P84101 59 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 LY6EQ16553 131 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 LCN15Q6UWW0 184 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 ABHD5Q8WTS1 349 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 ACY3Q96HD9 319 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 SLC25A22Q9H936 323 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 FSHBP01225 129 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 LINC00869P0C866 280 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 GATA3P23771 443 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 OPRK1P41145 380 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 RPL35P42766 123 aaKnown RBP11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 SLC25A33Q9BSK2 321 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms