RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 SETD2Q9BYW2 2564 aaPredicted RBP9.76□□□□□ -0.85
USF1-203ENST00000368021 ABCA1O95477 2261 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 MSGN1A6NI15 193 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 SSSCA1O60232 199 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 IGKV1-16P04430 117 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 RPL12P30050 165 aaKnown RBP9.75□□□□□ -0.85
USF1-203ENST00000368021 SELENOTP62341 195 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 DIAPH2-AS1Q14236 149 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 TMEM177Q53S58 311 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 ARSJQ5FYB0 599 aaPredicted RBP9.75□□□□□ -0.85
USF1-203ENST00000368021 CYB5R2Q6BCY4 276 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 OR4C13Q8NGP0 309 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 RAB40CQ96S21 281 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 LYRM2Q9NU23 88 aaPredicted RBP9.75□□□□□ -0.85
USF1-203ENST00000368021 WASHC3Q9Y3C0 194 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 WSB1Q9Y6I7 421 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 BORCS7-ASMTA0A0B4J1R7 106 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 KCNAB3O43448 404 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 SYNGR2O43760 224 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 CHST1O43916 411 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 ARG1P05089 322 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 HTR1DP28221 377 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 CEACAM3P40198 252 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 REG1BP48304 166 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 ATP6V1FQ16864 119 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 TMEM95Q3KNT9 176 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 LHX4Q969G2 390 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 ISOC2Q96AB3 205 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 RPEQ96AT9 228 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 FLYWCH2Q96CP2 140 aaKnown RBP9.75□□□□□ -0.85
USF1-203ENST00000368021 CTDSP1Q9GZU7 261 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 DPM3Q9P2X0 92 aa9.75□□□□□ -0.85
USF1-203ENST00000368021 TRBV24-1A0A075B6N3 115 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 IGHV1-3A0A0C4DH29 117 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 TOX4O94842 621 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 IL6RP08887 468 aaPredicted RBP9.74□□□□□ -0.85
USF1-203ENST00000368021 OR9G9P0C7N8 305 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
USF1-203ENST00000368021 USF1P22415 310 aaPredicted RBP9.74□□□□□ -0.85
USF1-203ENST00000368021 OR10J1P30954 320 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 TAS2R30P59541 319 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 UBE2KP61086 200 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 VAMP2P63027 116 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 PDLIM3Q53GG5 364 aaPredicted RBP9.74□□□□□ -0.85
USF1-203ENST00000368021 Q6ZRG5 221 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 ZNF429Q86V71 674 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 VKORC1L1Q8N0U8 176 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 OR10G4Q8NGN3 311 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
USF1-203ENST00000368021 GPR137BO60478 399 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 RELBQ01201 579 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 PRB3Q04118 309 aaPredicted RBP9.73□□□□□ -0.85
USF1-203ENST00000368021 PAX8Q06710 450 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 ELOBQ15370 118 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 TPTE2P1Q5T6R2 138 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 MINOS1Q5TGZ0 78 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 OR4A47Q6IF82 309 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 OR52E5Q8NH55 327 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 OR4A16Q8NH70 328 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 SMIM12Q96EX1 92 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 HARBI1Q96MB7 349 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 C20orf144Q9BQM9 153 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 EIF5A2Q9GZV4 153 aaKnown RBP9.73□□□□□ -0.85
USF1-203ENST00000368021 BET1LQ9NYM9 111 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 MINOS1-NBL1R4GNA1 71 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
USF1-203ENST00000368021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.73□□□□□ -0.852e-8■■■■■ 31.6
USF1-203ENST00000368021 CR1P17927 2039 aa9.73□□□□□ -0.85
USF1-203ENST00000368021 C15orf61A6NNL5 157 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 OOSP1A8MZH6 123 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 RBMXL2O75526 392 aaKnown RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 NXPH3O95157 252 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 TMEM50AO95807 157 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 LY6G6DO95868 133 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 NPSP0C0P6 89 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 UBE2E1P51965 193 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 RND2P52198 227 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 PAX9P55771 341 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 KLRD1Q13241 179 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 TVP23CQ96ET8 276 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 C1orf159Q96HA4 380 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 TBX15Q96SF7 602 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 TMEM14BQ9NUH8 114 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 TNCP24821 2201 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 A0A096LNT2 108 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 A0A1W2PPI3 338 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 LGALS7P47929 136 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 BAXQ07812 192 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms