RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 H3BUX3 64 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 IFNA7P01567 189 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 IGHV4-59P01825 116 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 REG1AP05451 166 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 OR8U8P0C7N1 319 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 SPP1P10451 314 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 HBG1P69891 147 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 HBG2P69892 147 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 DLK1P80370 383 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 ERHP84090 104 aaKnown RBP7.49□□□□□ -1.21
VTA1-201ENST00000367621 PLGLAQ15195 96 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 MLANAQ16655 118 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 ATP6V1FQ16864 119 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 FAM74A1Q5RGS3 127 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 OR10P1Q8NGE3 313 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 TMED6Q8WW62 240 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 SSMEM1Q8WWF3 244 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 C22orf15Q8WYQ4 148 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 SRSF8Q9BRL6 282 aaKnown RBP7.49□□□□□ -1.21
VTA1-201ENST00000367621 SLC25A33Q9BSK2 321 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 TMEM147Q9BVK8 224 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 GGACTQ9BVM4 153 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 PARD6GQ9BYG4 376 aaPredicted RBP7.49□□□□□ -1.21
VTA1-201ENST00000367621 SH3BGRL3Q9H299 93 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 UBQLN2Q9UHD9 624 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 ITGB1BP2Q9UKP3 347 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 PAIP2BQ9ULR5 123 aaKnown RBP7.49□□□□□ -1.21
VTA1-201ENST00000367621 ABCA1O95477 2261 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 BORCS7-ASMTA0A0B4J1R7 106 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 FGF16O43320 207 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 DFFBO76075 338 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 ACTL6BO94805 426 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 CRYGCP07315 174 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 APELAP0DMC3 54 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 CTRB1P17538 263 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 ATP6V0CP27449 155 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 IER3P46695 156 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 RAB11AP62491 216 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 RUNX1Q01196 453 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 ZNF266Q14584 549 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 LY6EQ16553 131 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 CTRB2Q6GPI1 263 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 Q6YL49 198 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 HSD17B11Q8NBQ5 300 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 PCNPQ8WW12 178 aaKnown RBP7.48□□□□□ -1.21
VTA1-201ENST00000367621 ARPC1AQ92747 370 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 PINX1Q96BK5 328 aaKnown RBP7.48□□□□□ -1.21
VTA1-201ENST00000367621 FAM103A1Q9BTL3 118 aaKnown RBP7.48□□□□□ -1.21
VTA1-201ENST00000367621 WDR61Q9GZS3 305 aaKnown RBP7.48□□□□□ -1.21
VTA1-201ENST00000367621 FNDC4Q9H6D8 234 aaPredicted RBP7.48□□□□□ -1.21
VTA1-201ENST00000367621 UQCC1Q9NVA1 299 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 MOB4Q9Y3A3 225 aa7.48□□□□□ -1.21
VTA1-201ENST00000367621 FNDC10F2Z333 226 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 CNIH1O95406 144 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 IFNA4P05014 189 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 NMBP08949 121 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 SEC11BP0C7V7 166 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 SNCAP37840 140 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 EIF5AP63241 154 aaKnown RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 KLK9Q2XQG4 91 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 C19orf54Q5BKX5 351 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 CLLU1Q5K131 121 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 IL17RELQ6ZVW7 336 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 HSD17B13Q7Z5P4 300 aaPredicted RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 CENPVQ7Z7K6 275 aaPredicted RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 TTC9CQ8N5M4 171 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 OR1P1Q8NH06 330 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 TAF15Q92804 592 aaKnown RBP eCLIP7.47□□□□□ -1.21
VTA1-201ENST00000367621 CLUHP3Q96NS8 147 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 SLC25A32Q9H2D1 315 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 MRPL36Q9P0J6 103 aaKnown RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 WDR83OSQ9Y284 106 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 LSM4Q9Y4Z0 139 aaKnown RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 F11RQ9Y624 299 aaKnown RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 MYO9AB2RTY4 2548 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 TET2Q6N021 2002 aaPredicted RBP7.47□□□□□ -1.21
VTA1-201ENST00000367621 ACANP16112 2415 aa7.47□□□□□ -1.21
VTA1-201ENST00000367621 UBE2L5PA0A1B0GUS4 154 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 NPIPB5A8MRT5 1133 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 SCAF4O95104 1147 aaKnown RBP7.46□□□□□ -1.22
VTA1-201ENST00000367621 IFNA5P01569 189 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 GPX4P36969 197 aaPredicted RBP7.46□□□□□ -1.22
VTA1-201ENST00000367621 CRIP2P52943 208 aaPredicted RBP7.46□□□□□ -1.22
VTA1-201ENST00000367621 CD69Q07108 199 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 GAMTQ14353 236 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 OR2T6Q8NHC8 308 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 RNASEH2CQ8TDP1 164 aaKnown RBP7.46□□□□□ -1.22
VTA1-201ENST00000367621 SMR3AQ99954 134 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 RSG1Q9BU20 258 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 MXRA5Q9NR99 2828 aa7.46□□□□□ -1.22
VTA1-201ENST00000367621 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
VTA1-201ENST00000367621 IGKV1OR2-108A0A075B7D4 117 aa7.45□□□□□ -1.22
VTA1-201ENST00000367621 I3L2K1 104 aa7.45□□□□□ -1.22
VTA1-201ENST00000367621 ATP6V0E1O15342 81 aa7.45□□□□□ -1.22
VTA1-201ENST00000367621 SULT1A2P50226 295 aa7.45□□□□□ -1.22
VTA1-201ENST00000367621 SUB1P53999 127 aaKnown RBP eCLIP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms