RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CT45A1Q5HYN5 189 aa6.72□□□□□ -1.33
CD46-208ENST00000367042 UNQ5815/PRO19632Q6UWF5 114 aa6.72□□□□□ -1.33
CD46-208ENST00000367042 C1orf229Q6ZS94 237 aaPredicted RBP6.72□□□□□ -1.33
CD46-208ENST00000367042 STPG4Q8N801 248 aa6.72□□□□□ -1.33
CD46-208ENST00000367042 CT45A3Q8NHU0 189 aa6.72□□□□□ -1.33
CD46-208ENST00000367042 FAM168AQ92567 244 aa6.72□□□□□ -1.33
CD46-208ENST00000367042 NAV3Q8IVL0 2385 aa6.72□□□□□ -1.33
CD46-208ENST00000367042 IGHV2OR16-5A0A0B4J2B6 119 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 YPEL1O60688 119 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 ZNF137PP52743 207 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 SLAQ13239 276 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 TMEM136Q6ZRR5 245 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 GCSAMQ8N6F7 178 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 C9orf106Q8NAJ2 232 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 YPEL2Q96QA6 119 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 IDI2-AS1Q9NZ38 188 aa6.71□□□□□ -1.33
CD46-208ENST00000367042 LSM4Q9Y4Z0 139 aaKnown RBP6.71□□□□□ -1.33
CD46-208ENST00000367042 TRBV9A0A0B4J1U6 114 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 A0A1W2PNU3 283 aaPredicted RBP6.71□□□□□ -1.34
CD46-208ENST00000367042 HYPMO75409 117 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 C8orf88P0DMB2 117 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 AREGP15514 252 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 CD24P25063 80 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 KIR2DS2P43631 304 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 GNG5P63218 68 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 Q0VG73 95 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 VAMP3Q15836 100 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 OR52E5Q8NH55 327 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 PRR7Q8TB68 274 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 SNRNP40Q96DI7 357 aaKnown RBP6.71□□□□□ -1.34
CD46-208ENST00000367042 HARBI1Q96MB7 349 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 PROCRQ9UNN8 238 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 AMMECR1Q9Y4X0 333 aaPredicted RBP6.71□□□□□ -1.34
CD46-208ENST00000367042 CACNA1HO95180 2353 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 CFAP47Q6ZTR5 3102 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 TRAV9-1A0A075B6T8 112 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 LNP1A1A4G5 178 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 M0QZ24 198 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 REG1AP05451 166 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 TNXAQ16473 311 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 PEAR1Q5VY43 1037 aaPredicted RBP6.71□□□□□ -1.34
CD46-208ENST00000367042 FAM216BQ8N7L0 139 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 MDS2Q8NDY4 140 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 H1FXQ92522 213 aaKnown RBP6.71□□□□□ -1.34
CD46-208ENST00000367042 SFXN3Q9BWM7 321 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 PRNDQ9UKY0 176 aa6.71□□□□□ -1.34
CD46-208ENST00000367042 IGHV1-18A0A0C4DH31 117 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 NKX2-8O15522 239 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 ENSAO43768 121 aaKnown RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 SLC25A5P05141 298 aaKnown RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 SELENOVP59797 346 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 ERHP84090 104 aaKnown RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 C1orf159Q96HA4 380 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 CLEC7AQ9BXN2 247 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 DCAF16Q9NXF7 216 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 CLEC5AQ9NY25 188 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 BET1LQ9NYM9 111 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 RNF24Q9Y225 148 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 ZFP30Q9Y2G7 519 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 TANC2Q9HCD6 1990 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 IGKV1OR2-108A0A075B7D4 117 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 A0A1W2PN81 502 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 SRRM5B3KS81 715 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 CSN3P07498 182 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 KIR2DL2P43627 348 aaPredicted RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 KLF3P57682 345 aaPredicted RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 LOXL3P58215 753 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 MORN5Q5VZ52 161 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 OR8B2Q96RD0 313 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 PAXXQ9BUH6 204 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 TPPP3Q9BW30 176 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 OSTCQ9NRP0 149 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 TECTAO75443 2155 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 COL27A1Q8IZC6 1860 aaPredicted RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 PCSK5Q92824 1860 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 PRSS46E5RG02 174 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 IGKV3-15P01624 115 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 IGLC2P0DOY2 106 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 IGLC3P0DOY3 106 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 SRSF6Q13247 344 aaKnown RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 TMEM249Q2WGJ8 235 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 OR10J3Q5JRS4 329 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 C10orf55Q5SWW7 151 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 BHLHA15Q7RTS1 189 aaPredicted RBP6.7□□□□□ -1.34
CD46-208ENST00000367042 DEFB123Q8N688 67 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 OR4C5Q8NGB2 326 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 OR1B1Q8NGR6 318 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 NPIPB3Q92617 1050 aa6.7□□□□□ -1.34
CD46-208ENST00000367042 TRGV8A0A0C4DH27 118 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 SH2D7A6NKC9 451 aaPredicted RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 ZNF891A8MT65 544 aaPredicted RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 HIGD1CA8MV81 97 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 MMP23AO75900 390 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 SAA1P0DJI8 122 aaPredicted RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 SFTPCP11686 197 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 COMPP49747 757 aaPredicted RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 PRRX1P54821 245 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 PRR20EP86478 221 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 PRR20CP86479 221 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms