RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ZNF502Q8TBZ5 544 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 TMEM170AQ8WVE7 144 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 LOC389332A0A1B0GUA5 103 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 MOSP00540 346 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ZNF324BQ6AW86 544 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 PAQR4Q8N4S7 273 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 PARD6GQ9BYG4 376 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 C17orf100A8MU93 164 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR11H12B2RN74 326 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 RPL39P5Q59GN2 51 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 VKORC1L1Q8N0U8 176 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR11H1Q8NG94 326 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR11H2Q8NH07 326 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 OTORQ9NRC9 128 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 FNDC10F2Z333 226 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 NAPSAO96009 420 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 GPX1P07203 203 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 C17orf98A8MV24 154 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 NTN3O00634 580 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 SLC50A1Q9BRV3 221 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 C21orf62Q9NYP8 219 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 C19orf54Q5BKX5 351 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 DNLZQ5SXM8 178 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 PRR19A6NJB7 356 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 LEMD1Q68G75 181 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 TBL2Q9Y4P3 447 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 LY96Q9Y6Y9 160 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 PLP1P60201 277 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 SIGLEC12Q96PQ1 595 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 PRCDQ00LT1 54 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 WDR82Q6UXN9 313 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR13A1Q8NGR1 328 aa10.1□□□□□ -0.79
CDC42BPA-203ENST00000366766 OTX1P32242 354 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 MRPL52Q86TS9 123 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 PF4V1P10720 104 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 IGHV1-2P23083 117 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 MORN2Q502X0 79 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 TRAV24A0A0B4J272 114 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 LYL1P12980 280 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 CSRP1P21291 193 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 FAM169BQ8N8A8 192 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 FOXA2Q9Y261 457 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 BSPH1Q075Z2 132 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 GFI1Q99684 422 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 PRDM13Q9H4Q3 707 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 PIEZO1Q92508 2521 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 C9JCJ5 164 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 UPK2O00526 184 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 LGALS3P17931 250 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR10J3Q5JRS4 329 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 A1L4Q6 167 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 COX6B1P14854 86 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 ARPC1AQ92747 370 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 RNF5Q99942 180 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 SPINK2P20155 84 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 DUTP33316 252 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 TEX45Q8NA69 505 aa10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 SSBP3Q9BWW4 388 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-203ENST00000366766 TCRBV4S1A1TA0A5B7 111 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 PNKDQ8N490 385 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 FOXL1Q12952 345 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 TCF21O43680 179 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 PLAUP00749 431 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 AGMATQ9BSE5 352 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 SRRM5B3KS81 715 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 ZNF841Q6ZN19 808 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 PCDH15Q96QU1 1955 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 MYOD1P15172 320 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 SAA2-SAA4A0A096LPE2 208 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 SAA2P0DJI9 122 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 FAM71F2Q6NXP2 309 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 GSN-AS1Q9NRJ2 163 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 TGIF1Q15583 401 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 GPHA2Q96T91 129 aa10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H1AQ02539 215 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-203ENST00000366766 IGHV3-21A0A0B4J1V1 117 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 OOSP1A8MZH6 123 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 UBE2L6O14933 153 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 CGAP01215 116 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 MST1P26927 711 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 CHCHD1Q96BP2 118 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A1W2PRD5 423 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A1W2PRF3 423 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A1W2PRM7 423 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 PRR32B1ATL7 298 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 NBR2O15453 112 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 NXT2Q9NPJ8 142 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 RRHO14718 337 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 ATP5J2P56134 94 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 HEPN1Q6WQI6 88 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 LOC105371267A0A1B0GV96 52 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms