RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 LOC100506127A0A0U1RQW1 187 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 GPR31O00270 319 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 XRCC3O43542 346 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 S100GP29377 79 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 TAS2R46P59540 309 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 STHQ8IWL8 128 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 OR5H2Q8NGV7 314 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 OR6F1Q8NGZ6 308 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
MRPL55-217ENST00000366746 S100A16Q96FQ6 103 aaKnown RBP12.18□□□□□ -0.46
MRPL55-217ENST00000366746 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 IGHV3-66A0A0C4DH42 116 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 NPBWR1P48145 328 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
MRPL55-217ENST00000366746 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 VSIRQ9H7M9 311 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 RABAC1Q9UI14 185 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 DNAH10Q8IVF4 4471 aa12.17□□□□□ -0.46
MRPL55-217ENST00000366746 TMEM127O75204 238 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-217ENST00000366746 PHLDA2Q53GA4 152 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 TMEM41BQ5BJD5 291 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 LINC00336Q6ZUF6 198 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 Q8NAQ8 132 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
MRPL55-217ENST00000366746 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-217ENST00000366746 IGHV4-28A0A0C4DH34 117 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 MIFP14174 115 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
MRPL55-217ENST00000366746 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 ZNF600Q6ZNG1 722 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 FAM24BQ8N5W8 94 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 SEC22AQ96IW7 307 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.46
MRPL55-217ENST00000366746 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
MRPL55-217ENST00000366746 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 A0A1W2PS18 150 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
MRPL55-217ENST00000366746 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 NPPCP23582 126 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 SNCAP37840 140 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 TSPAN5P62079 268 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
MRPL55-217ENST00000366746 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-217ENST00000366746 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
MRPL55-217ENST00000366746 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 SPP1P10451 314 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 NAT1P18440 290 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 HLA-DMAP28067 261 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 PRSS3P35030 304 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 HRH1P35367 487 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 TAS2R20P59543 309 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 Q6ZTC4 211 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 CROCCP3Q8IVE0 287 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 YTHDF1Q9BYJ9 559 aaKnown RBP12.13□□□□□ -0.47
MRPL55-217ENST00000366746 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 HECTD4Q9Y4D8 3996 aa12.13□□□□□ -0.47
MRPL55-217ENST00000366746 TMEM50AO95807 157 aa12.12□□□□□ -0.47
MRPL55-217ENST00000366746 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-217ENST00000366746 UBE2NLQ5JXB2 153 aa12.12□□□□□ -0.47
MRPL55-217ENST00000366746 TRPT1Q86TN4 253 aaKnown RBP12.12□□□□□ -0.47
MRPL55-217ENST00000366746 LYSMD2Q8IV50 215 aa12.12□□□□□ -0.47
MRPL55-217ENST00000366746 STXBP6Q8NFX7 210 aa12.12□□□□□ -0.47
MRPL55-217ENST00000366746 MRGPRFQ96AM1 343 aa12.12□□□□□ -0.47
MRPL55-217ENST00000366746 A0A1B0GU03 582 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
MRPL55-217ENST00000366746 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 SAMD12Q8N8I0 201 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 METTL26Q96S19 204 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 RNF126Q9BV68 326 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 Q9H521 79 aa12.11□□□□□ -0.47
MRPL55-217ENST00000366746 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 ZNF705EA8MWA4 302 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-217ENST00000366746 K7EQG2 157 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 ACTL10Q5JWF8 245 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 SLC35G3Q8N808 338 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 TMEM230Q96A57 120 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 NARS2Q96I59 477 aaKnown RBP12.1□□□□□ -0.47
MRPL55-217ENST00000366746 TBC1D24Q9ULP9 559 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 X6R8D5 127 aa12.1□□□□□ -0.47
MRPL55-217ENST00000366746 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-217ENST00000366746 CORTO00230 105 aa12.09□□□□□ -0.47
MRPL55-217ENST00000366746 SCGB2A1O75556 95 aa12.09□□□□□ -0.47
MRPL55-217ENST00000366746 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
MRPL55-217ENST00000366746 P2RY1P47900 373 aa12.09□□□□□ -0.47
MRPL55-217ENST00000366746 NEDD8Q15843 81 aa12.09□□□□□ -0.47
MRPL55-217ENST00000366746 CLEC5AQ9NY25 188 aa12.09□□□□□ -0.47
MRPL55-217ENST00000366746 VPS13DQ5THJ4 4388 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms