RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FREM3P0C091 2139 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 COPS9Q8WXC6 57 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 OTORQ9NRC9 128 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 CGAP01215 116 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 TBX15Q96SF7 602 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 GFI1Q99684 422 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 DUSP14O95147 198 aaKnown RBP11.18□□□□□ -0.62
LDB3-202ENST00000361373 TRGC2P03986 189 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 RHOGP84095 191 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 ZNF474Q6S9Z5 364 aaPredicted RBP11.18□□□□□ -0.62
LDB3-202ENST00000361373 LHFPL1Q86WI0 220 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 NDUFS8O00217 210 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 RNF125Q96EQ8 232 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 TMEM238LA0A1B0GVL6 79 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 RNF222A6NCQ9 220 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 A6NJY4 79 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 CMC4P56277 68 aaPredicted RBP11.17□□□□□ -0.62
LDB3-202ENST00000361373 ZNF56Q15929 161 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 CLDN16Q9Y5I7 305 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 ROS1P08922 2347 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 ERVH48-1M5A8F1 160 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 DTX1Q86Y01 620 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 SPTAN1Q13813 2472 aaKnown RBP11.17□□□□□ -0.62
LDB3-202ENST00000361373 STAG3L2P0CL84 134 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 VN1R17PQ8TDU5 208 aa11.17□□□□□ -0.62
LDB3-202ENST00000361373 BTCP35070 178 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 A0A087WV48 116 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 Q6ZS49 121 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 KLHDC3Q9BQ90 382 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 IGKV1-27A0A075B6S5 117 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 ASCL2Q99929 193 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 HSPB9Q9BQS6 159 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 ZNF324O75467 553 aaPredicted RBP11.16□□□□□ -0.62
LDB3-202ENST00000361373 CD5P06127 495 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 C8orf46Q8TAG6 207 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
LDB3-202ENST00000361373 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
LDB3-202ENST00000361373 TRAV20A0A0B4J274 112 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 PSPNO60542 156 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 SRSF6Q13247 344 aaKnown RBP11.15□□□□□ -0.62
LDB3-202ENST00000361373 TPTE2P1Q5T6R2 138 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 PIP4P1Q86T03 277 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 WDR83OSQ9Y284 106 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 DPRXA6NFQ7 191 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 ZNF207O43670 478 aaKnown RBP11.15□□□□□ -0.62
LDB3-202ENST00000361373 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 ADIPOQQ15848 244 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 MDC1Q14676 2089 aaKnown RBP11.15□□□□□ -0.62
LDB3-202ENST00000361373 A0A087X0M5 115 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 IGHV3-49A0A0A0MS15 119 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 TRAV14DV4A0A0A6YYC5 116 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 A0A1B0GX30 115 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 PKIAP61925 76 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 PRSS8Q16651 343 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 ITLN2Q8WWU7 325 aaPredicted RBP11.15□□□□□ -0.62
LDB3-202ENST00000361373 DCAF16Q9NXF7 216 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 S4R3C0 116 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 RAMP3O60896 148 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 SRIP30626 198 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 OR4D5Q8NGN0 318 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 Q9H3A6 140 aa11.15□□□□□ -0.62
LDB3-202ENST00000361373 DIDO1Q9BTC0 2240 aaKnown RBP11.15□□□□□ -0.63
LDB3-202ENST00000361373 TRBV20OR9-2A0A075B6H5 130 aa11.15□□□□□ -0.63
LDB3-202ENST00000361373 A0A1B0GUT8 65 aa11.15□□□□□ -0.63
LDB3-202ENST00000361373 MPTX1A8MV57 137 aa11.15□□□□□ -0.63
LDB3-202ENST00000361373 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.63
LDB3-202ENST00000361373 CD177Q8N6Q3 437 aa11.15□□□□□ -0.63
LDB3-202ENST00000361373 SGK494Q96LW2 274 aa11.15□□□□□ -0.63
LDB3-202ENST00000361373 RNF126Q9BV68 326 aa11.15□□□□□ -0.63
LDB3-202ENST00000361373 ABCA4P78363 2273 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 MED12Q93074 2177 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 A0A0B4J293 547 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 FOLR2P14207 255 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 MIR17HGQ75NE6 70 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 SSC4DQ8WTU2 575 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 CARHSP1Q9Y2V2 147 aaKnown RBP11.14□□□□□ -0.63
LDB3-202ENST00000361373 NPFFO15130 113 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
LDB3-202ENST00000361373 IFITM2Q01629 132 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms