RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 KRTAP10-3P60369 221 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 VAMP2P63027 116 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 RPP30P78346 268 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 Q5BKY6 102 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 SPANXN5Q5MJ07 72 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 OR4C12Q96R67 309 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 OR5AC2Q9NZP5 309 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 NBEAL1Q6ZS30 2694 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 E5RGE8 158 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 TRGV3P03979 118 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 RPL23AP62750 156 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 RHOGP84095 191 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 FGL1Q08830 312 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 PRSS54Q6PEW0 395 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 TMEM65Q6PI78 240 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 TMEM14EPQ6UXP3 125 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 LCNL1Q6ZST4 164 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 NECAP1Q8NC96 275 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 OR4X2Q8NGF9 303 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 OR2T35Q8NGX2 323 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 WFDC12Q8WWY7 111 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 ST6GAL2Q96JF0 529 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 RANGRFQ9HD47 186 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 THYN1Q9P016 225 aa9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-201ENST00000359683 G3V3Q6 166 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 CORTO00230 105 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 OR2J3O76001 311 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 NDUFB8O95169 186 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 RPLP1P05386 114 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 PET100P0DJ07 73 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 CD28P10747 220 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 TPPP2P59282 170 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 USMG5Q96IX5 58 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 FBXL7Q9UJT9 491 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 PMS2P5A8MQ11 134 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 H3BP45 60 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 I3L2K1 104 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 K7EIM0 57 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 CCNKO75909 580 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 SLC25A4P12235 298 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 P2RY1P47900 373 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 RAB11AP62491 216 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 THAP6Q8TBB0 222 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 MISP3Q96FF7 219 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 LYRM2Q9NU23 88 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 MBD2Q9UBB5 411 aa9.64□□□□□ -0.87
NIF3L1-201ENST00000359683 A0A0G2JLM5 398 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 IFNA4P05014 189 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 OR8U8P0C7N1 319 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 CDX1P47902 265 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 ATP5G2Q06055 141 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 EXOSC2Q13868 293 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 ETV3LQ6ZN32 361 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 TMEM252Q8N6L7 170 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 VN1R17PQ8TDU5 208 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-201ENST00000359683 TCRBV4S1A1TA0A5B7 111 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 MT-CO2P00403 227 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 CAV2P51636 162 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 MLANAQ16655 118 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 AKAP14Q86UN6 197 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 C11orf44Q8N8P7 122 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 SCARB1Q8WTV0 552 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 CXorf58Q96LI9 332 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 CITED4Q96RK1 184 aa9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 CITED2Q99967 270 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 PAIP2BQ9ULR5 123 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-201ENST00000359683 IGSF23A1L1A6 192 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 SMLR1H3BR10 107 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 METTL15P1P0C7V9 234 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 DEFA5Q01523 94 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 CD69Q07108 199 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 HAPLN4Q86UW8 402 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 CACNG8Q8WXS5 425 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 DCUN1D4Q92564 292 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 PINX1Q96BK5 328 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 CITED1Q99966 193 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 NEURL2Q9BR09 285 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 ZNF747Q9BV97 191 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 SLC25A31Q9H0C2 315 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 TSSC4Q9Y5U2 329 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 TENM1Q9UKZ4 2725 aa9.61□□□□□ -0.87
NIF3L1-201ENST00000359683 RPS10-NUDT3A0A1W2PQS6 291 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 MFSD2BA6NFX1 497 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 OPRK1P41145 380 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 SULT1A1P50225 295 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms