RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DYNLT3P51808 116 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 RAB11AP62491 216 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 RUNX1Q01196 453 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 TM4SF20Q53R12 229 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 AWAT1Q58HT5 328 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 ZNF705AQ6ZN79 300 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 OR2C3Q8N628 320 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 TMEM18Q96B42 140 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 AKR1E2Q96JD6 320 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 TPPP3Q9BW30 176 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 C11orf1Q9H5F2 150 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 ABCA2Q9BZC7 2435 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 CSPG4Q6UVK1 2322 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 A4D1N5 150 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 NDUFB3O43676 98 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 YPEL1O60688 119 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 PITX3O75364 302 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 IGKV1-16P04430 117 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 OR9G9P0C7N8 305 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 RHOGP84095 191 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 SRSF3P84103 164 aaKnown RBP4.15□□□□□ -1.74
ATXN3-202ENST00000359366 ID3Q02535 119 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 ARL16Q0P5N6 197 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 EFNB3Q15768 340 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 FBLN7Q53RD9 439 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 TCTEX1D4Q5JR98 221 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 SPANXN5Q5MJ07 72 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 TMEM252Q8N6L7 170 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 OR5C1Q8NGR4 320 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 YPEL4Q96NS1 127 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 YPEL2Q96QA6 119 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 QTRT1Q9BXR0 403 aaKnown RBP4.15□□□□□ -1.74
ATXN3-202ENST00000359366 RAB1BQ9H0U4 201 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 TMEM231Q9H6L2 316 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 IDI2-AS1Q9NZ38 188 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 JPT1Q9UK76 154 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 COX11Q9Y6N1 276 aa4.15□□□□□ -1.74
ATXN3-202ENST00000359366 CCDC168Q8NDH2 2452 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 IGHV3-72A0A0B4J1Y9 119 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 A0A1W2PRD5 423 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 A0A1W2PRF3 423 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 A0A1W2PRM7 423 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 hADV38S2A0JD32 116 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 TNFRSF13BO14836 293 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-202ENST00000359366 GPR137BO60478 399 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 OR2C1O95371 312 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 CATR1Q13166 79 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 CR1LQ2VPA4 569 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 LRRC10Q5BKY1 277 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 LDLRAD2Q5SZI1 272 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 H2BFWTQ7Z2G1 175 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 SLC35E3Q7Z769 313 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 CACNG8Q8WXS5 425 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM186Q96B77 213 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF714Q96N38 554 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 SPIN2AQ99865 258 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 SPIN2BQ9BPZ2 258 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM204Q9BSN7 226 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 VCX2Q9H322 139 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 RBKSQ9H477 322 aa4.15□□□□□ -1.75
ATXN3-202ENST00000359366 RPUSD1Q9UJJ7 312 aaKnown RBP4.15□□□□□ -1.75
ATXN3-202ENST00000359366 A0A1B0GU03 582 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 SYNGR2O43760 224 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 MT-CO2P00403 227 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 AMBPP02760 352 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 WNT2P09544 360 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 FAM157CP0CG43 387 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 COX7A1P24310 79 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 P2RY1P47900 373 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM249Q2WGJ8 235 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 TRAT1Q6PIZ9 186 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM182Q6ZP80 229 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 HAPLN4Q86UW8 402 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF439Q8NDP4 499 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 NRGNQ92686 78 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 IL22RA2Q969J5 263 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 PINX1Q96BK5 328 aaKnown RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 ACY3Q96HD9 319 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 HSD17B10Q99714 261 aaKnown RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 MRPL20Q9BYC9 149 aaKnown RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 SPANXA1Q9NS26 97 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 PSENENQ9NZ42 101 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 LPAR3Q9UBY5 353 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 LINC00312Q9Y6C7 94 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 NAV2Q8IVL1 2488 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF469Q96JG9 3925 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 SRRM4A7MD48 611 aaKnown RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 M0R036 132 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 DANCRP0C864 163 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 P0C879 139 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 CT45A6P0DMU7 189 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 CT45A5P0DMU8 189 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 CT45A7P0DMV0 189 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 SNCAP37840 140 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 LGALS7P47929 136 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 UBE2KP61086 200 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM183BQ1AE95 376 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 MIDNQ504T8 468 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms