RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 PITPNC1Q9UKF7 332 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 SMCO3A2RU48 225 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 H3BUX3 64 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 FGF16O43320 207 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 TSPAN9O75954 239 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 NMBP08949 121 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 FGF7P21781 194 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 SULT1A2P50226 295 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 RUNX1Q01196 453 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 SCGB2A2Q13296 93 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 KRTAP24-1Q3LI83 254 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 OR2G3Q8NGZ4 309 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 RNASEH2CQ8TDP1 164 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 PSMG3Q9BT73 122 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 TMEM160Q9NX00 188 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 TIMM9Q9Y5J7 89 aa10.98□□□□□ -0.65
PDLIM5-203ENST00000359265 CORTO00230 105 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 MPDU1O75352 247 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 REG1AP05451 166 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 AREGP15514 252 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 RAB5CP51148 216 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 CX3CL1P78423 397 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 C16orf82Q7Z2V1 217 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 C5orf56Q8N8D9 126 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 PIFOQ8TCI5 191 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 TAF15Q92804 592 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 P2RX4Q99571 388 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 WDR83OSQ9Y284 106 aa10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 SOX21Q9Y651 276 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-203ENST00000359265 A6NDX4 124 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 GPX4P36969 197 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 SRP14P37108 136 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 AKR1C1Q04828 323 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 CD69Q07108 199 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 DEFB112Q30KQ8 113 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 AKR1C8PQ5T2L2 129 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 BTNL8Q6UX41 500 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 TMEM182Q6ZP80 229 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 TMEM219Q86XT9 240 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 ZNF709Q8N972 641 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 OR1L6Q8NGR2 347 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 OR1P1Q8NH06 330 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 CACNG8Q8WXS5 425 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 SLC35E1Q96K37 410 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 KCNIP2Q9NS61 270 aa10.96□□□□□ -0.65
PDLIM5-203ENST00000359265 IGHV7-81A0A0B4J1V7 117 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 BTBD17A6NE02 478 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 ZNF705EA8MWA4 302 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 TRIM77I1YAP6 450 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 M0QZK8 103 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 PRH1P02810 166 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 FAM157CP0CG43 387 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 APELAP0DMC3 54 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 MDKP21741 143 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 OPRK1P41145 380 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 BLOC1S1P78537 153 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 LY6EQ16553 131 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 ARSJQ5FYB0 599 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 PVRIGQ6DKI7 326 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 ETFRF1Q6IPR1 90 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 SLC16A13Q7RTY0 426 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 OR5R1Q8NH85 324 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 SAT2Q96F10 170 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 FAM103A1Q9BTL3 118 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 NPVFQ9HCQ7 196 aa10.95□□□□□ -0.66
PDLIM5-203ENST00000359265 MEGF8Q7Z7M0 2845 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 LINC00862A6NCI5 91 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 NPIPB5A8MRT5 1133 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 CYB5BO43169 146 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 SOX15O60248 233 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 CTRB1P17538 263 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 CAMLGP49069 296 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 SERF2P84101 59 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 NDPQ00604 133 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 RAB31Q13636 194 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 CTRB2Q6GPI1 263 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 CENPVQ7Z7K6 275 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 MISP3Q96FF7 219 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 NPCDR1Q9BY65 106 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 PARP11Q9NR21 331 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 PFDN2Q9UHV9 154 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 FBXO7Q9Y3I1 522 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 TGP01266 2768 aa10.94□□□□□ -0.66
PDLIM5-203ENST00000359265 DEFA4P12838 97 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 TEPPQ6URK8 271 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 Q6ZRG5 221 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms