RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 KLRD1Q13241 179 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 OR1P1Q8NH06 330 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 NXT2Q9NPJ8 142 aaKnown RBP10.83□□□□□ -0.68
NLRC3-202ENST00000359128 NPDC1Q9NQX5 325 aaPredicted RBP10.83□□□□□ -0.68
NLRC3-202ENST00000359128 TNFRSF14Q92956 283 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 PMCHL2Q9BQD1 86 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
NLRC3-202ENST00000359128 A0A0G2JMZ2 1700 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 LRRC37A2A6NM11 1700 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 C2orf68Q2NKX9 166 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 ZNF497Q6ZNH5 498 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 CIARTQ8N365 385 aaPredicted RBP10.83□□□□□ -0.68
NLRC3-202ENST00000359128 WBP1Q96G27 269 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 RNF125Q96EQ8 232 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 IGHV2-26A0A0B4J1V2 119 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 ASCL2Q99929 193 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 CCDC88CQ9P219 2028 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 ZFC3H1O60293 1989 aaKnown RBP10.82□□□□□ -0.68
NLRC3-202ENST00000359128 BEND2Q8NDZ0 799 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 ZNF414Q96IQ9 312 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 ATP5LO75964 103 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 MIR17HGQ75NE6 70 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 ADARB2-AS1A8MUL3 147 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 J3QKU1 62 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 TRAF4Q9BUZ4 470 aaPredicted RBP10.82□□□□□ -0.68
NLRC3-202ENST00000359128 IGLV3-32A0A0A0MS00 114 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 C15orf61A6NNL5 157 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 Q0VFX4 171 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 CRIM1Q9NZV1 1036 aa10.82□□□□□ -0.68
NLRC3-202ENST00000359128 OR11H12B2RN74 326 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 DANCRP0C864 163 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 OR11H1Q8NG94 326 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 OR11H2Q8NH07 326 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 GAGE10A6NGK3 116 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 COL5A1-AS1Q5SY13 56 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 CHD5Q8TDI0 1954 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 MINOS1Q5TGZ0 78 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 SLC25A34Q6PIV7 304 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 BRD3OSQ6XYD6 125 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 RNF166Q96A37 237 aaPredicted RBP10.81□□□□□ -0.68
NLRC3-202ENST00000359128 CHCHD5Q9BSY4 110 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 MINOS1-NBL1R4GNA1 71 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 SCO2A0A1W2PP80 73 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 OVOL1O14753 267 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 SIGLEC5O15389 551 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 IFI27P40305 119 aaPredicted RBP10.81□□□□□ -0.68
NLRC3-202ENST00000359128 CD200R1LQ6Q8B3 271 aa10.81□□□□□ -0.68
NLRC3-202ENST00000359128 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 FABP5P3A8MUU1 101 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 GATA2P23769 480 aaPredicted RBP10.8□□□□□ -0.68
NLRC3-202ENST00000359128 A0A1B0GW15 77 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 H3BUX3 64 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
NLRC3-202ENST00000359128 FBLN7Q53RD9 439 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 Q6AWC8 147 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 FOXC2Q99958 501 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 SELENOKQ9Y6D0 94 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
NLRC3-202ENST00000359128 GHRHP01286 108 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 TPTE2P1Q5T6R2 138 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 TRAV8-6A0A0B4J262 113 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 NDUFA3O95167 84 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 LCNL1Q6ZST4 164 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 JKAMPQ9P055 326 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 TMEM50AO95807 157 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 EGR1P18146 543 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 AICDAQ9GZX7 198 aa10.8□□□□□ -0.68
NLRC3-202ENST00000359128 TMEM178BH3BS89 294 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 SMIM6P0DI80 62 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 VCX2Q9H322 139 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 CD5P06127 495 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 C11orf91Q3C1V1 193 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 Q5PR19 223 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 LINC00114Q6XXX2 140 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 DTX1Q86Y01 620 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 TSPAN13O95857 204 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 OTOFQ9HC10 1997 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 SCN2AQ99250 2005 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 CD8AP01732 235 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 TCF23Q7RTU1 214 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 LYZL4Q96KX0 146 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 Q96MF0 132 aa10.79□□□□□ -0.68
NLRC3-202ENST00000359128 MLNRO43193 412 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 TEX38Q6PEX7 206 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 IL36BQ9NZH7 164 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 M0R1W7 72 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 CD300CQ08708 224 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 SRSF6Q13247 344 aaKnown RBP10.78□□□□□ -0.68
NLRC3-202ENST00000359128 ZNF660Q6AZW8 331 aaPredicted RBP10.78□□□□□ -0.68
NLRC3-202ENST00000359128 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
NLRC3-202ENST00000359128 RCHY1Q96PM5 261 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 TRBV6-7A0A0A0MS04 114 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 UCP1P25874 307 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms