RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 ANXA3P12429 323 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 EDN2P20800 178 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 SNCAP37840 140 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 SPCS3P61009 180 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 SRPXP78539 464 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 OR52E5Q8NH55 327 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 ZNF436Q9C0F3 470 aaPredicted RBP12.9□□□□□ -0.34
FAM3D-201ENST00000358781 ENY2Q9NPA8 101 aa12.9□□□□□ -0.34
FAM3D-201ENST00000358781 A0A0B4J2A0 478 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 IGHV3-35A0A0C4DH35 117 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 MT-CO2P00403 227 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 CBLN1P23435 193 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 Q56UQ5 140 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 PVRIGQ6DKI7 326 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 LGI3Q8N145 548 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 GAR1Q9NY12 217 aaKnown RBP12.89□□□□□ -0.35
FAM3D-201ENST00000358781 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
FAM3D-201ENST00000358781 SHPKQ9UHJ6 478 aa12.89□□□□□ -0.35
FAM3D-201ENST00000358781 NAP1L6A6NFF2 107 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 ADMP35318 185 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 SUB1P53999 127 aaKnown RBP eCLIP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 MFAP4P55083 255 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 DEFB114Q30KQ6 69 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 CD300EQ496F6 205 aaPredicted RBP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 TM4SF20Q53R12 229 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 NMSQ5H8A3 153 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 Q8N1Y9 231 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 CACNG8Q8WXS5 425 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 TXN2Q99757 166 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 PALMDQ9NP74 551 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 UFC1Q9Y3C8 167 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 CTSGP08311 255 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 CCR6P51684 374 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
FAM3D-201ENST00000358781 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 TMEM190Q8WZ59 177 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 CACFD1Q9UGQ2 172 aa12.88□□□□□ -0.35
FAM3D-201ENST00000358781 PIGBOS1A0A0B4J2F0 54 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 NDUFA4O00483 81 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 IL7P13232 177 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 VAMP1P23763 118 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 CENPSQ8N2Z9 138 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 UXS1Q8NBZ7 420 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 MLXQ9UH92 298 aa12.87□□□□□ -0.35
FAM3D-201ENST00000358781 HUWE1Q7Z6Z7 4374 aaKnown RBP12.86□□□□□ -0.35
FAM3D-201ENST00000358781 LINC00854A0A1B0GVQ3 168 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 CEBPZOSA8MTT3 80 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 CORTO00230 105 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 NUPL2O15504 423 aaKnown RBP12.86□□□□□ -0.35
FAM3D-201ENST00000358781 NDUFB6O95139 128 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 HTR2BP41595 481 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 PPP1R1AQ13522 171 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 SMCO1Q147U7 214 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 GTSCR1Q86UQ5 136 aa12.86□□□□□ -0.35
FAM3D-201ENST00000358781 HEYLQ9NQ87 328 aaPredicted RBP12.86□□□□□ -0.35
FAM3D-201ENST00000358781 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 CENPXA8MT69 81 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 SFT2D2O95562 160 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
FAM3D-201ENST00000358781 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
FAM3D-201ENST00000358781 RELQ04864 619 aaPredicted RBP12.85□□□□□ -0.35
FAM3D-201ENST00000358781 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 LRTM2Q8N967 370 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 DUSP18Q8NEJ0 188 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
FAM3D-201ENST00000358781 C7orf50Q9BRJ6 194 aaKnown RBP12.85□□□□□ -0.35
FAM3D-201ENST00000358781 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
FAM3D-201ENST00000358781 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
FAM3D-201ENST00000358781 A0A1B0GU03 582 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 A6NHS1 94 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 GNG7O60262 68 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 NXPH3O95157 252 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 IGHV4-30-4P0DP06 118 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 BTCP35070 178 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 NPBWR1P48145 328 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 TNFRSF9Q07011 255 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 WDR89Q96FK6 387 aaPredicted RBP12.84□□□□□ -0.35
FAM3D-201ENST00000358781 ASCL2Q99929 193 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
FAM3D-201ENST00000358781 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms