RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FBXL7Q9UJT9 491 aa19.74■□□□□ 0.75
SSBP3-202ENST00000357475 KLK9Q9UKQ9 250 aa19.74■□□□□ 0.75
SSBP3-202ENST00000357475 H3BUA1 57 aa19.73■□□□□ 0.75
SSBP3-202ENST00000357475 IGHV3-48P01763 117 aa19.73■□□□□ 0.75
SSBP3-202ENST00000357475 ELANEP08246 267 aa19.73■□□□□ 0.75
SSBP3-202ENST00000357475 TAS2R30P59541 319 aa19.73■□□□□ 0.75
SSBP3-202ENST00000357475 C18orf65Q6ZTR6 163 aa19.73■□□□□ 0.75
SSBP3-202ENST00000357475 PINX1Q96BK5 328 aaKnown RBP19.73■□□□□ 0.75
SSBP3-202ENST00000357475 ZFP57Q9NU63 452 aa19.73■□□□□ 0.75
SSBP3-202ENST00000357475 IGSF23A1L1A6 192 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 MFSD2BA6NFX1 497 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 TSC22D2O75157 780 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 RLN2P04090 185 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 METTL15P1P0C7V9 234 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 CAV2P51636 162 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 TMEM65Q6PI78 240 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 OR4X2Q8NGF9 303 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 MYOZ3Q8TDC0 251 aa19.72■□□□□ 0.75
SSBP3-202ENST00000357475 STRAPQ9Y3F4 350 aaKnown RBP19.72■□□□□ 0.75
SSBP3-202ENST00000357475 BRI3O95415 125 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 IGHV3-23P01764 117 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 PVALBP20472 110 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-202ENST00000357475 SUB1P53999 127 aaKnown RBP eCLIP19.71■□□□□ 0.75
SSBP3-202ENST00000357475 RPL23AP62750 156 aaKnown RBP19.71■□□□□ 0.75
SSBP3-202ENST00000357475 TMEM14EPQ6UXP3 125 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 AKAP14Q86UN6 197 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 HAPLN4Q86UW8 402 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 CITED2Q99967 270 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-202ENST00000357475 FNDC4Q9H6D8 234 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-202ENST00000357475 LYRM2Q9NU23 88 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-202ENST00000357475 PMS2P5A8MQ11 134 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 E5RGE8 158 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 I3L2K1 104 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 K7EIM0 57 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 LYL1P12980 280 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 ARL16Q0P5N6 197 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 C15orf32Q32M92 178 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 COMMD1Q8N668 190 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 DCUN1D4Q92564 292 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 SLA2Q9H6Q3 261 aa19.71■□□□□ 0.75
SSBP3-202ENST00000357475 COL6A5A8TX70 2615 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 MT-CO2P00403 227 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 IGHV3-11P01762 117 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 IFNA4P05014 189 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 OR8U8P0C7N1 319 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 TMEM252Q8N6L7 170 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 NECAP1Q8NC96 275 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 THAP6Q8TBB0 222 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 MDFIQ99750 246 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 NEURL2Q9BR09 285 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 GNB4Q9HAV0 340 aa19.7■□□□□ 0.74
SSBP3-202ENST00000357475 MRPL36Q9P0J6 103 aaKnown RBP19.7■□□□□ 0.74
SSBP3-202ENST00000357475 PRSS46E5RG02 174 aa19.69■□□□□ 0.74
SSBP3-202ENST00000357475 PET100P0DJ07 73 aa19.69■□□□□ 0.74
SSBP3-202ENST00000357475 HIST1H1BP16401 226 aaKnown RBP19.69■□□□□ 0.74
SSBP3-202ENST00000357475 ETV3LQ6ZN32 361 aa19.69■□□□□ 0.74
SSBP3-202ENST00000357475 ZNF491Q8N8L2 437 aa19.69■□□□□ 0.74
SSBP3-202ENST00000357475 OR1L6Q8NGR2 347 aa19.69■□□□□ 0.74
SSBP3-202ENST00000357475 OR5B12Q96R08 314 aa19.69■□□□□ 0.74
SSBP3-202ENST00000357475 CST7O76096 145 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 LY86O95711 162 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 P2RY1P47900 373 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 FGL1Q08830 312 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 KHDC1LQ5JSQ8 128 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 OR8G2PQ6IF36 304 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 OR11H4Q8NGC9 324 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 SCARB1Q8WTV0 552 aa19.68■□□□□ 0.74
SSBP3-202ENST00000357475 BSCL2Q96G97 398 aaPredicted RBP19.68■□□□□ 0.74
SSBP3-202ENST00000357475 TCRBV4S1A1TA0A5B7 111 aa19.67■□□□□ 0.74
SSBP3-202ENST00000357475 OPRK1P41145 380 aa19.67■□□□□ 0.74
SSBP3-202ENST00000357475 RIPPLY3P57055 190 aa19.67■□□□□ 0.74
SSBP3-202ENST00000357475 RAB11AP62491 216 aa19.67■□□□□ 0.74
SSBP3-202ENST00000357475 RPP30P78346 268 aaKnown RBP19.67■□□□□ 0.74
SSBP3-202ENST00000357475 FXYD6-FXYD2A0A087WZ82 144 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 A0A1W2PRX2 142 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 FAM223BA6NKX1 122 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 ATP5G2Q06055 141 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 FAM223AQ8IWN6 122 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 TCTE3Q8IZS6 198 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 RNASEH2CQ8TDP1 164 aaKnown RBP19.66■□□□□ 0.74
SSBP3-202ENST00000357475 SLC25A4P12235 298 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 ATP5IP56385 69 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-202ENST00000357475 NHLH2Q02577 135 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 CCDC140Q96MF4 163 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 THYN1Q9P016 225 aa19.66■□□□□ 0.74
SSBP3-202ENST00000357475 ADARB2-AS1A8MUL3 147 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 CORTO00230 105 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 CYB5BO43169 146 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 EWSR1Q01844 656 aaKnown RBP eCLIP19.65■□□□□ 0.742e-6■■■□□ 19
SSBP3-202ENST00000357475 CD69Q07108 199 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 EXOSC2Q13868 293 aaKnown RBP19.65■□□□□ 0.74
SSBP3-202ENST00000357475 NOXA1Q86UR1 476 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 TMEM217Q8N7C4 229 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 STAB1Q9NY15 2570 aa19.65■□□□□ 0.74
SSBP3-202ENST00000357475 F8W735 103 aaPredicted RBP19.64■□□□□ 0.73
SSBP3-202ENST00000357475 TRBV12-3P01733 135 aa19.64■□□□□ 0.73
SSBP3-202ENST00000357475 USMG5Q96IX5 58 aa19.64■□□□□ 0.73
SSBP3-202ENST00000357475 UBE2E2Q96LR5 201 aa19.64■□□□□ 0.73
SSBP3-202ENST00000357475 CITED1Q99966 193 aa19.64■□□□□ 0.73
SSBP3-202ENST00000357475 RPL12P30050 165 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms