RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TNFRSF1AP19438 455 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 CBLN1P23435 193 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 ZNF90Q03938 601 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 AESQ08117 197 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 Q8N976 141 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 OR5AU1Q8NGC0 362 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 LPAR2Q9HBW0 351 aa10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 YTHDF2Q9Y5A9 579 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-202ENST00000357348 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 J3QKU1 62 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 AREGP15514 252 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 GABRA2P47869 451 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 MRPS11P82912 194 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 SPINK9Q5DT21 86 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 FAM216AQ8WUB2 273 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 NINJ1Q92982 152 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 C1orf159Q96HA4 380 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 PATZ1Q9HBE1 687 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 SRRM5B3KS81 715 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 NPSP0C0P6 89 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 OR10J4P0C629 311 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 CD33P20138 364 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 CTRLP40313 264 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 GATA4P43694 442 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 HLA-DRB5Q30154 266 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 GNB1LQ9BYB4 327 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 RNF7Q9UBF6 113 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 ARL2-SNX15V9GYD0 113 aa10.34□□□□□ -0.75
RTFDC1-202ENST00000357348 NDUFS7O75251 213 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 GCHFRP30047 84 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 SMIM21Q3B7S5 101 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 VAMP8Q9BV40 100 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 FBN2P35556 2912 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 PROP1O75360 226 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 RBMXL2O75526 392 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 REG1AP05451 166 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 COL8A2P25067 703 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 HTD2P86397 168 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 MIC13Q5XKP0 118 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 CD177Q8N6Q3 437 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 TPRX1Q8N7U7 411 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 OR4B1Q8NGF8 309 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 OR1L6Q8NGR2 347 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 MRGPRDQ8TDS7 321 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 EAF1Q96JC9 268 aaPredicted RBP10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 V9GYV3 84 aa10.33□□□□□ -0.76
RTFDC1-202ENST00000357348 LHBP01229 141 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 GPX1P07203 203 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 ADH4P08319 380 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 THBS3P49746 956 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 RPL31P62899 125 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 COX19Q49B96 90 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 ARSJQ5FYB0 599 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 CYB5R2Q6BCY4 276 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 ZNRF1Q8ND25 227 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 NRGNQ92686 78 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 FBXL7Q9UJT9 491 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 POLQO75417 2590 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 TANC2Q9HCD6 1990 aa10.32□□□□□ -0.76
RTFDC1-202ENST00000357348 IGKV1D-17A0A075B6S4 117 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 IGHV1-69-2A0A0G2JMI3 117 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 C15orf65H3BRN8 121 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 MT-ND6P03923 174 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 LINC00205P59089 165 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 OR10J3Q5JRS4 329 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 C11orf71Q6IPW1 123 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 FAM90A1Q86YD7 464 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 Q8TCH9 128 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 RNF2Q99496 336 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 PAM16Q9Y3D7 125 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 F2Z2F3 143 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 SLC17A3O00476 420 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 FCN1O00602 326 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 COX6B1P14854 86 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 PRDX2P32119 198 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 SSTR5P35346 364 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 HIST2H2BCQ6DN03 193 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 TRAT1Q6PIZ9 186 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 MMD2Q8IY49 270 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 OR13A1Q8NGR1 328 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 VN1R17PQ8TDU5 208 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 NPVFQ9HCQ7 196 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 SLC45A2Q9UMX9 530 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 CBY1Q9Y3M2 126 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 RNF114Q9Y508 228 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 ABCA12Q86UK0 2595 aa10.31□□□□□ -0.76
RTFDC1-202ENST00000357348 MT-CO2P00403 227 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 RELBQ01201 579 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 EDDM3AQ14507 147 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 COL5A1-AS1Q5SY13 56 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 BAGE2Q86Y30 109 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 CCL13Q99616 98 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 SPOCK3Q9BQ16 436 aa10.3□□□□□ -0.76
RTFDC1-202ENST00000357348 RAB1BQ9H0U4 201 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms