RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PSMG3Q9BT73 122 aaPredicted RBP14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
SMARCD3-202ENST00000356800 FNDC10F2Z333 226 aa14.34□□□□□ -0.11
SMARCD3-202ENST00000356800 SUB1P53999 127 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMARCD3-202ENST00000356800 CENPVQ7Z7K6 275 aaPredicted RBP14.34□□□□□ -0.11
SMARCD3-202ENST00000356800 ZNF114Q8NC26 417 aa14.34□□□□□ -0.11
SMARCD3-202ENST00000356800 PITPNC1Q9UKF7 332 aa14.34□□□□□ -0.11
SMARCD3-202ENST00000356800 ZNF705EA8MWA4 302 aaPredicted RBP14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 TRIM77I1YAP6 450 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 LY6G6DO95868 133 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 MFAP2P55001 183 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 PVRIGQ6DKI7 326 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 CXorf58Q96LI9 332 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 WDR83OSQ9Y284 106 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 TIMM9Q9Y5J7 89 aa14.33□□□□□ -0.11
SMARCD3-202ENST00000356800 LINC01548A6NM66 108 aa14.33□□□□□ -0.12
SMARCD3-202ENST00000356800 SRP14P37108 136 aaKnown RBP14.33□□□□□ -0.12
SMARCD3-202ENST00000356800 ABHD5Q8WTS1 349 aa14.33□□□□□ -0.12
SMARCD3-202ENST00000356800 RSG1Q9BU20 258 aa14.33□□□□□ -0.12
SMARCD3-202ENST00000356800 MPDU1O75352 247 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 BLOC1S1P78537 153 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 SERF2P84101 59 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 TMEM182Q6ZP80 229 aaPredicted RBP14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 C16orf82Q7Z2V1 217 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 OR5R1Q8NH85 324 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 RNASEH2CQ8TDP1 164 aaKnown RBP14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 DMRT1Q9Y5R6 373 aa14.32□□□□□ -0.12
SMARCD3-202ENST00000356800 FGF7P21781 194 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 ARSJQ5FYB0 599 aaPredicted RBP14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 SIGLECL1Q8N7X8 197 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 CACNG8Q8WXS5 425 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 NPVFQ9HCQ7 196 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 PARP11Q9NR21 331 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 TNFRSF19Q9NS68 423 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 TMEM160Q9NX00 188 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 RFNGQ9Y644 331 aa14.31□□□□□ -0.12
SMARCD3-202ENST00000356800 HIVEP1P15822 2718 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 ATP6V0E1O15342 81 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 HOXA3O43365 443 aaPredicted RBP14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 CTRB1P17538 263 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 GPX4P36969 197 aaPredicted RBP14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 CTRB2Q6GPI1 263 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 BTNL8Q6UX41 500 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 TREML4Q6UXN2 200 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 COMMD7Q86VX2 200 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 OR1P1Q8NH06 330 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 NPCDR1Q9BY65 106 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 PFDN2Q9UHV9 154 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 VPREB3Q9UKI3 123 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 LSM4Q9Y4Z0 139 aaKnown RBP14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 F11RQ9Y624 299 aaKnown RBP14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 SETXQ7Z333 2677 aaKnown RBP14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 M0QZK8 103 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 BLCAPP62952 87 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 CD69Q07108 199 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 MLANAQ16655 118 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 AKR1C8PQ5T2L2 129 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 PXDC1Q5TGL8 231 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 DPPA3Q6W0C5 159 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 LFNGQ8NES3 379 aa14.3□□□□□ -0.12
SMARCD3-202ENST00000356800 SMCO3A2RU48 225 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 PRH1P02810 166 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 CRYGCP07315 174 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 HNF1AP20823 631 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 Q6ZS46 218 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 LYPD6BQ8NI32 183 aa14.29□□□□□ -0.12
SMARCD3-202ENST00000356800 BTBD17A6NE02 478 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 C17orf112F2Z3M2 114 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 SOX15O60248 233 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 CD99P14209 185 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 Q6ZRG5 221 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 TTC9CQ8N5M4 171 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 ZNF709Q8N972 641 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 WNT10AQ9GZT5 417 aa14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 FNDC4Q9H6D8 234 aaPredicted RBP14.28□□□□□ -0.12
SMARCD3-202ENST00000356800 CYSRT1A8MQ03 144 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 NPIPB5A8MRT5 1133 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 CORTO00230 105 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 CAMLGP49069 296 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 FHITP49789 147 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 C9orf152Q5JTZ5 239 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 TEPPQ6URK8 271 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 TMEM144Q7Z5S9 345 aa14.27□□□□□ -0.12
SMARCD3-202ENST00000356800 MFSD2BA6NFX1 497 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 NUDT19A8MXV4 375 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 IGHG2P01859 326 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 GAMTQ14353 236 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 SLC16A13Q7RTY0 426 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 EIF4E3Q8N5X7 224 aaKnown RBP14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 MTORP42345 2549 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 G3V318 75 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 FOSL1P15407 271 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 AKR1C1Q04828 323 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 ECSCRQ19T08 205 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 C19orf54Q5BKX5 351 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 OR5T1Q8NG75 326 aa14.26□□□□□ -0.13
SMARCD3-202ENST00000356800 OR1L6Q8NGR2 347 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms