RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 IGKV1D-43A0A0B4J1Z2 117 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 PRR32B1ATL7 298 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 GHRHP01286 108 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 OR2K2Q8NGT1 345 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 PHLDA1Q8WV24 401 aaPredicted RBP13.48□□□□□ -0.25
RXRA-201ENST00000356384 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 ZNFX1Q9P2E3 1918 aaKnown RBP13.48□□□□□ -0.25
RXRA-201ENST00000356384 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 FABP5P3A8MUU1 101 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 IGHV2OR16-5A0A0B4J2B6 119 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 IGLV3-21P80748 117 aaPredicted RBP13.48□□□□□ -0.25
RXRA-201ENST00000356384 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
RXRA-201ENST00000356384 NPIPB13A6NJU9 1138 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 ZNF585BQ52M93 769 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 ZNF525Q8N782 197 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 COQ2Q96H96 371 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 LAMTOR2Q9Y2Q5 125 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 UNC13CQ8NB66 2214 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
RXRA-201ENST00000356384 TMEM167AQ8TBQ9 72 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 YAE1D1Q9NRH1 226 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 ADMP35318 185 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 COLCA1Q6ZS62 124 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 CHCHD2Q9Y6H1 151 aaPredicted RBP13.47□□□□□ -0.25
RXRA-201ENST00000356384 PPIFP30405 207 aaKnown RBP13.47□□□□□ -0.25
RXRA-201ENST00000356384 RPL23P62829 140 aaKnown RBP13.47□□□□□ -0.25
RXRA-201ENST00000356384 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 FAM181AQ8N9Y4 354 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 CKS1BP61024 79 aa13.47□□□□□ -0.25
RXRA-201ENST00000356384 C1orf162Q8NEQ5 155 aaPredicted RBP13.47□□□□□ -0.25
RXRA-201ENST00000356384 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.25
RXRA-201ENST00000356384 SHISA3A0PJX4 238 aa13.46□□□□□ -0.25
RXRA-201ENST00000356384 CCL3L1P16619 93 aa13.46□□□□□ -0.25
RXRA-201ENST00000356384 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
RXRA-201ENST00000356384 PSG7Q13046 419 aa13.46□□□□□ -0.25
RXRA-201ENST00000356384 CDKN1AP38936 164 aa13.46□□□□□ -0.26
RXRA-201ENST00000356384 ASCL2Q99929 193 aa13.46□□□□□ -0.26
RXRA-201ENST00000356384 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 A0A087WWC5 75 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 EVI2AP22794 236 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 SRSF1Q07955 248 aaKnown RBP eCLIP13.45□□□□□ -0.26
RXRA-201ENST00000356384 LINC00312Q9Y6C7 94 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 MDC1Q14676 2089 aaKnown RBP13.45□□□□□ -0.26
RXRA-201ENST00000356384 TRGV4A0A0C4DH28 118 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 A0A0G2JK05 382 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 NBR2O15453 112 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 CD28P10747 220 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 CD24P25063 80 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 DPM2O94777 84 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 CRPP02741 224 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
RXRA-201ENST00000356384 HOXA3O43365 443 aaPredicted RBP13.45□□□□□ -0.26
RXRA-201ENST00000356384 CELA3BP08861 270 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 MYOD1P15172 320 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 LAIR2Q6ISS4 152 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 WFDC12Q8WWY7 111 aa13.45□□□□□ -0.26
RXRA-201ENST00000356384 SEPSECSQ9HD40 501 aaKnown RBP13.45□□□□□ -0.26
RXRA-201ENST00000356384 TRAV8-4A0A0B4J246 113 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 VDAC2P45880 294 aaPredicted RBP13.44□□□□□ -0.26
RXRA-201ENST00000356384 GP6Q9HCN6 339 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 TDGF1P3P51864 188 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 SRSF6Q13247 344 aaKnown RBP13.44□□□□□ -0.26
RXRA-201ENST00000356384 FAM89BQ8N5H3 189 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 CYSLTR1Q9Y271 337 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 ZNF646O15015 1829 aaPredicted RBP13.44□□□□□ -0.26
RXRA-201ENST00000356384 ZNF638Q14966 1978 aaKnown RBP13.44□□□□□ -0.26
RXRA-201ENST00000356384 HBDP02042 147 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 IGHV1-2P23083 117 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 PLPPR1Q8TBJ4 325 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 ANAPC13Q9BS18 74 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 A0A0G2JMM0 328 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 A0A1W2PPB8 328 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 A0A1W2PRS3 328 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 KIR3DP1A8MWS1 328 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 C1QTNF5Q9BXJ0 243 aa13.44□□□□□ -0.26
RXRA-201ENST00000356384 CHTOPQ9Y3Y2 248 aaKnown RBP13.44□□□□□ -0.26
RXRA-201ENST00000356384 TBX6O95947 436 aaPredicted RBP13.43□□□□□ -0.26
RXRA-201ENST00000356384 PYYP10082 97 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 SLC50A1Q9BRV3 221 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 UPK2O00526 184 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 GREM1O60565 184 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 PRB4P10163 310 aaPredicted RBP13.43□□□□□ -0.26
RXRA-201ENST00000356384 WDR90Q96KV7 1748 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 SEC16AO15027 2179 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 UMODP07911 640 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 C3orf36Q3SXR2 165 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 RNF222A6NCQ9 220 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 CCL20P78556 96 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 VGLL1Q99990 258 aa13.43□□□□□ -0.26
RXRA-201ENST00000356384 TRAV14DV4A0A0A6YYC5 116 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 C17orf100A8MU93 164 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 GGTLC3B5MD39 225 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 PLNP26678 52 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 EPDR1Q9UM22 224 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms