RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 EPDR1Q9UM22 224 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 LY75O60449 1722 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 CELA3AP09093 270 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 S100A7L2Q5SY68 101 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 CFHR5Q9BXR6 569 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
LMX1B-201ENST00000355497 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 LAIR2Q6ISS4 152 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 C15orf61A6NNL5 157 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 TIAF1O95411 115 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 C1QTNF9P0C862 333 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 SCN9AQ15858 1988 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 TRAV14DV4A0A0A6YYC5 116 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 NDUFAF3Q9BU61 184 aa12.46□□□□□ -0.41
LMX1B-201ENST00000355497 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.42
LMX1B-201ENST00000355497 PPBPP02775 128 aa12.46□□□□□ -0.42
LMX1B-201ENST00000355497 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.42
LMX1B-201ENST00000355497 TMEM86BQ8N661 226 aa12.46□□□□□ -0.42
LMX1B-201ENST00000355497 CHCHD1Q96BP2 118 aaKnown RBP12.46□□□□□ -0.42
LMX1B-201ENST00000355497 RNF125Q96EQ8 232 aa12.46□□□□□ -0.42
LMX1B-201ENST00000355497 IGKV1D-43A0A0B4J1Z2 117 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 TRGV4A0A0C4DH28 118 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 TOMM40O96008 361 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 M0R2P5 195 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 CST9LQ9H4G1 147 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 TCRBV4S1A1TA0A5B7 111 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 MIA3Q5JRA6 1907 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 SHISA3A0PJX4 238 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 ADARB2-AS1A8MUL3 147 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 EVI2AP22794 236 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 DTX2Q86UW9 622 aa12.45□□□□□ -0.42
LMX1B-201ENST00000355497 TRBV6-7A0A0A0MS04 114 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 GFRA3O60609 400 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 ZNF48Q96MX3 618 aaPredicted RBP12.44□□□□□ -0.42
LMX1B-201ENST00000355497 GNB1LQ9BYB4 327 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 TRPM6Q9BX84 2022 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 TRIP11Q15643 1979 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 LOC105371267A0A1B0GV96 52 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 NAPSAO96009 420 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 IGHV1-2P23083 117 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 PSG7Q13046 419 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 REPIN1Q9BWE0 567 aaKnown RBP12.44□□□□□ -0.42
LMX1B-201ENST00000355497 COL18A1P39060 1754 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 YPEL1O60688 119 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 TBX6O95947 436 aaPredicted RBP12.44□□□□□ -0.42
LMX1B-201ENST00000355497 LGALS1P09382 135 aaKnown RBP12.44□□□□□ -0.42
LMX1B-201ENST00000355497 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 PCM1Q15154 2024 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 GLI3P10071 1580 aa12.44□□□□□ -0.42
LMX1B-201ENST00000355497 ZFC3H1O60293 1989 aaKnown RBP12.43□□□□□ -0.42
LMX1B-201ENST00000355497 C17orf100A8MU93 164 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 GREM1O60565 184 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
LMX1B-201ENST00000355497 LINC00158P58513 81 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 EDA2RQ9HAV5 297 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 HSD52Q0P140 79 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 GATD1Q8NB37 220 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 MORN3Q6PF18 240 aaPredicted RBP12.43□□□□□ -0.42
LMX1B-201ENST00000355497 PYYP10082 97 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 SAMD5Q5TGI4 173 aa12.43□□□□□ -0.42
LMX1B-201ENST00000355497 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 PRSS22Q9GZN4 317 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 ATRAIDQ6UW56 229 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 F2Z2F3 143 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
LMX1B-201ENST00000355497 GAGE2BQ13066 116 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 UMODP07911 640 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 KIF13BQ9NQT8 1826 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 CCL3L1P16619 93 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 LURAP1LQ8IV03 231 aa12.42□□□□□ -0.42
LMX1B-201ENST00000355497 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
LMX1B-201ENST00000355497 ATP5L2Q7Z4Y8 100 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 A0A1W2PR77 199 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 VWC2LB2RUY7 222 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 CELA3BP08861 270 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 SEC11AP67812 179 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 SSBP2P81877 361 aaPredicted RBP12.41□□□□□ -0.42
LMX1B-201ENST00000355497 RHOGP84095 191 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 OVOL1O14753 267 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 C1QL4Q86Z23 238 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 RNF126Q9BV68 326 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 NPC2P61916 151 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 SRSF3P84103 164 aaKnown RBP12.41□□□□□ -0.42
LMX1B-201ENST00000355497 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms