RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 B2MP61769 119 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 MMDQ15546 238 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 MIC13Q5XKP0 118 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 IGKV1D-37A0A075B6S9 117 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 FCN1O00602 326 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 FBP1P09467 338 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 BRS3P32247 399 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 SSX2Q16385 188 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 FBLN7Q53RD9 439 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 FAM106CPP0CH98 169 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 SAA4P35542 130 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 LCN15Q6UWW0 184 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 RNF2Q99496 336 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 TRGV9Q99603 122 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 C1RLQ9NZP8 487 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 MSMBP08118 114 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 OR5G3P0C626 314 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 FAM122CQ6P4D5 195 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
VPS13B-201ENST00000355155 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 SPTBN1Q01082 2364 aaKnown RBP13.67□□□□□ -0.22
VPS13B-201ENST00000355155 DNASE2O00115 360 aaPredicted RBP13.67□□□□□ -0.22
VPS13B-201ENST00000355155 AREGP15514 252 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 SELENOTP62341 195 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 CYP2G1PQ6ZSU1 146 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
VPS13B-201ENST00000355155 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
VPS13B-201ENST00000355155 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 TTC9CQ8N5M4 171 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 Q8N9W7 124 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 CLRN3Q8NCR9 226 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 ARHGAP32A7KAX9 2087 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 TCRBV4S1A1TA0A5B7 111 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 B4DSR2 109 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 SCO1O75880 301 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 RHOBP62745 196 aa13.66□□□□□ -0.22
VPS13B-201ENST00000355155 MRPL32Q9BYC8 188 aaKnown RBP13.66□□□□□ -0.22
VPS13B-201ENST00000355155 TNCP24821 2201 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 I3L2K1 104 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 PLP1P60201 277 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 DEFA5Q01523 94 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 CLEC12BQ2HXU8 276 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 TMEM250H0YL14 139 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 CXorf1O96002 111 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 PERPQ96FX8 193 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 GNG13Q9P2W3 67 aa13.65□□□□□ -0.22
VPS13B-201ENST00000355155 J3QLI3 93 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 PLA2G2AP14555 144 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 TMEM11P17152 192 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 PAX6P26367 422 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 OR10J1P30954 320 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 CRIP2P52943 208 aaPredicted RBP13.64□□□□□ -0.23
VPS13B-201ENST00000355155 HAGHQ16775 308 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 A0A1W2PRD5 423 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 A0A1W2PRF3 423 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 A0A1W2PRM7 423 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
VPS13B-201ENST00000355155 BPIFB3P59826 476 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 MLANAQ16655 118 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 ASPHD1Q5U4P2 390 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 PRSS57Q6UWY2 283 aa13.64□□□□□ -0.23
VPS13B-201ENST00000355155 TPRP12270 2363 aaKnown RBP13.64□□□□□ -0.23
VPS13B-201ENST00000355155 KMT2BQ9UMN6 2715 aaPredicted RBP13.64□□□□□ -0.23
VPS13B-201ENST00000355155 FXYD3Q14802 87 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 GCSAMLQ5JQS6 135 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 OR2T6Q8NHC8 308 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 GATAD1Q8WUU5 269 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 FUT9Q9Y231 359 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 A0A1W2PPV4 95 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 CD81P60033 236 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 SOHLH1Q5JUK2 328 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 NANPQ8TBE9 248 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 RXFP4Q8TDU9 374 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 SSMEM1Q8WWF3 244 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 EGR2P11161 476 aaPredicted RBP13.63□□□□□ -0.23
VPS13B-201ENST00000355155 NPBWR1P48145 328 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 PLGLAQ15195 96 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 RHEBQ15382 184 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 TUBA4BQ9H853 241 aa13.63□□□□□ -0.23
VPS13B-201ENST00000355155 MRPL36Q9P0J6 103 aaKnown RBP13.63□□□□□ -0.23
VPS13B-201ENST00000355155 MEF2BQ02080 365 aaPredicted RBP13.62□□□□□ -0.23
VPS13B-201ENST00000355155 HNF4GQ14541 408 aa13.62□□□□□ -0.23
VPS13B-201ENST00000355155 FAM74A3Q4VXF1 159 aa13.62□□□□□ -0.23
VPS13B-201ENST00000355155 ARPC1AQ92747 370 aa13.62□□□□□ -0.23
VPS13B-201ENST00000355155 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
VPS13B-201ENST00000355155 FCGR2BP31994 310 aaPredicted RBP13.62□□□□□ -0.23
VPS13B-201ENST00000355155 CX3CL1P78423 397 aa13.62□□□□□ -0.23
VPS13B-201ENST00000355155 DEFB113Q30KQ7 82 aa13.62□□□□□ -0.23
VPS13B-201ENST00000355155 LINC01356Q8N9X3 169 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms