RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PLXNB1O43157 2135 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 CST7O76096 145 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 FGF2P09038 288 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 RAB5CP51148 216 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 RPP30P78346 268 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 EBI3Q14213 229 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 MMDQ15546 238 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 ATP6V1FQ16864 119 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 HSD17B13Q7Z5P4 300 aaPredicted RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 EIF4E3Q8N5X7 224 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 OR4A5Q8NH83 315 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 GNPNAT1Q96EK6 184 aaPredicted RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 RCC1LQ96I51 464 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 CLCC1Q96S66 551 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 TSNAXQ99598 290 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 QTRT1Q9BXR0 403 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 PARD6GQ9BYG4 376 aaPredicted RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 TMEM14BQ9NUH8 114 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 FKBP11Q9NYL4 201 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 PRNDQ9UKY0 176 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 ZNF257Q9Y2Q1 563 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 WASHC3Q9Y3C0 194 aa9.06□□□□□ -0.96
CDRT1-202ENST00000354433 STRAPQ9Y3F4 350 aaKnown RBP9.06□□□□□ -0.96
CDRT1-202ENST00000354433 ANKRD34BA5PLL1 514 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 MFSD2BA6NFX1 497 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 UPK2O00526 184 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 IFNA17P01571 189 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 HSPE1P61604 102 aaKnown RBP9.05□□□□□ -0.96
CDRT1-202ENST00000354433 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 CLINT1Q14677 625 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 SPANXN5Q5MJ07 72 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 TEX38Q6PEX7 206 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 C18orf65Q6ZTR6 163 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 SSX9Q7RTT3 188 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 COMMD1Q8N668 190 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 Q8N6K4 173 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 Q8N9W7 124 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 WFDC9Q8NEX5 89 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 DPF1Q92782 380 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 FLYWCH2Q96CP2 140 aaKnown RBP9.05□□□□□ -0.96
CDRT1-202ENST00000354433 RBMXL1Q96E39 390 aaKnown RBP9.05□□□□□ -0.96
CDRT1-202ENST00000354433 CXorf58Q96LI9 332 aa9.05□□□□□ -0.96
CDRT1-202ENST00000354433 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 H3BP45 60 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 H7C2Y5 167 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 SHOXO15266 292 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 IFNA5P01569 189 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 OR8U8P0C7N1 319 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 METTL15P1P0C7V9 234 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 TMEM267Q0VDI3 215 aaPredicted RBP9.04□□□□□ -0.96
CDRT1-202ENST00000354433 VKORC1L1Q8N0U8 176 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 TMEM217Q8N7C4 229 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 VSTM2AQ8TAG5 236 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 CITED4Q96RK1 184 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 PARP11Q9NR21 331 aa9.04□□□□□ -0.96
CDRT1-202ENST00000354433 ZNF705EA8MWA4 302 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 UMAD1C9J7I0 102 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 IGKV1-16P04430 117 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 LGALS7P47929 136 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 F2RL1P55085 397 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 ATP5IP56385 69 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 OR2B8PP59922 312 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 MRPL41Q8IXM3 137 aaKnown RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 LINC00482Q8N8I6 264 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 PINX1Q96BK5 328 aaKnown RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 TRAV3A0A0B4J244 114 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 RAB19A4D1S5 217 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 PMS2P5A8MQ11 134 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 KBTBD11O94819 623 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 SAA1P0DJI8 122 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 ATP6V0CP27449 155 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 HOXD3P31249 432 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 SLC38A11Q08AI6 406 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 LCNL1Q6ZST4 164 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 HSD17B11Q8NBQ5 300 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 OR10P1Q8NGE3 313 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 OR5B3Q8NH48 314 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 HARBI1Q96MB7 349 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 DUX3Q96PT4 197 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 RNF5Q99942 180 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-202ENST00000354433 GPR61Q9BZJ8 451 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 KIAA1456Q9P272 454 aa9.03□□□□□ -0.96
CDRT1-202ENST00000354433 SRRM4A7MD48 611 aaKnown RBP9.02□□□□□ -0.97
CDRT1-202ENST00000354433 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.97
CDRT1-202ENST00000354433 RPS16P62249 146 aaKnown RBP9.02□□□□□ -0.97
CDRT1-202ENST00000354433 ARL16Q0P5N6 197 aa9.02□□□□□ -0.97
CDRT1-202ENST00000354433 VWC2Q2TAL6 325 aa9.02□□□□□ -0.97
CDRT1-202ENST00000354433 UQCC3Q6UW78 93 aa9.02□□□□□ -0.97
CDRT1-202ENST00000354433 DPPA3Q6W0C5 159 aa9.02□□□□□ -0.97
CDRT1-202ENST00000354433 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms