RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 NCKAP5O14513 1909 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 LRP4O75096 1905 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 PTPRSQ13332 1948 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 A1L4Q6 167 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 PRSS46E5RG02 174 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 NOGQ13253 232 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 FOXI2Q6ZQN5 318 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 HSPB8Q9UJY1 196 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 CSN3P07498 182 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 HSD17B10Q99714 261 aaKnown RBP10.87□□□□□ -0.67
IFT88-202ENST00000351808 IGLV3-32A0A0A0MS00 114 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 A0A1B0GXF2 115 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 KLF7O75840 302 aaPredicted RBP10.87□□□□□ -0.67
IFT88-202ENST00000351808 FAM87AP0C7U9 286 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 ZNF137PP52743 207 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 CCL7P80098 99 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 TIMM23BQ5SRD1 257 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 TEPPQ6URK8 271 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 LINC00473A8K010 186 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 WISP2O76076 250 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 CER1O95813 267 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 IGHV3-7P01780 117 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 PRAMEF5Q5TYX0 476 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 PRAMEF6Q5VXH4 476 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 VGLL1Q99990 258 aa10.87□□□□□ -0.67
IFT88-202ENST00000351808 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
IFT88-202ENST00000351808 HCFC1P51610 2035 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 ETDBQ3ZM63 59 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 C1orf122Q6ZSJ8 110 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 NFAM1Q8NET5 270 aaPredicted RBP10.86□□□□□ -0.67
IFT88-202ENST00000351808 OR4A16Q8NH70 328 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 ADTRPQ96IZ2 230 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 ZNF479Q96JC4 524 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 TMPRSS3P57727 454 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 EIF4EBP1Q13541 118 aaPredicted RBP10.86□□□□□ -0.67
IFT88-202ENST00000351808 Q6P435 159 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 WDFY3Q8IZQ1 3526 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 FOXB1Q99853 325 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
IFT88-202ENST00000351808 TSPAN13O95857 204 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 RAC3P60763 192 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 HBBP68871 147 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.85□□□□□ -0.67
IFT88-202ENST00000351808 MOB1BQ7L9L4 216 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 LINC00596Q86U02 117 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 YAF2Q8IY57 180 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 ABHD17AQ96GS6 310 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 INSIG2Q9Y5U4 225 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 TET2Q6N021 2002 aaPredicted RBP10.85□□□□□ -0.67
IFT88-202ENST00000351808 GFRA3O60609 400 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 INSL3P51460 131 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 ZBTB34Q8NCN2 500 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 NABP2Q9BQ15 211 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 MRPL16Q9NX20 251 aaKnown RBP10.85□□□□□ -0.67
IFT88-202ENST00000351808 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
IFT88-202ENST00000351808 MPC1Q9Y5U8 109 aa10.85□□□□□ -0.67
IFT88-202ENST00000351808 F11RQ9Y624 299 aaKnown RBP10.85□□□□□ -0.67
IFT88-202ENST00000351808 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
IFT88-202ENST00000351808 SMAD7O15105 426 aaKnown RBP10.84□□□□□ -0.67
IFT88-202ENST00000351808 FAM231DQ6ZW35 169 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 VKORC1L1Q8N0U8 176 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 OR10D3Q8NH80 312 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 SPTY2D1-AS1A0A0U1RR47 76 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 OR2H2O95918 312 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 VDAC2P45880 294 aaPredicted RBP10.84□□□□□ -0.67
IFT88-202ENST00000351808 ATP5L2Q7Z4Y8 100 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 SRXN1Q9BYN0 137 aa10.84□□□□□ -0.67
IFT88-202ENST00000351808 A0A0J9YW62 118 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 KBTBD11-OT1A0A1B0GTJ5 212 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PRR20EP86478 221 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PRR20CP86479 221 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PRR20DP86480 221 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PRR20BP86481 221 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PRR20AP86496 221 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 ANKRD37Q7Z713 158 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 TAAR6Q96RI8 345 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 ZNF747Q9BV97 191 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PRDM14Q9GZV8 571 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 LOXL2Q9Y4K0 774 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 K7ERJ3 54 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 MTURNQ8N3F0 131 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 TRAV3A0A0B4J244 114 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 SLC25A17O43808 307 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 IGHV3-9P01782 118 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 CYC1P08574 325 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 CR1LQ2VPA4 569 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PCP2Q8IVA1 136 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 FADS6Q8N9I5 356 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 OR9G4Q8NGQ1 327 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 RNF183Q96D59 192 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
IFT88-202ENST00000351808 SGK494Q96LW2 274 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms