RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CDKN1AP38936 164 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 TCF23Q7RTU1 214 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 TMEM144Q7Z5S9 345 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 CENPVQ7Z7K6 275 aaPredicted RBP13.35□□□□□ -0.27
PTPN11-201ENST00000351677 PPP1R27Q86WC6 154 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 Q9H3A6 140 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 NPIPB6E9PJ23 425 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 COTL1Q14019 142 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 ZNF56Q15929 161 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 LEMD1Q68G75 181 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
PTPN11-201ENST00000351677 DUTP33316 252 aaKnown RBP13.34□□□□□ -0.27
PTPN11-201ENST00000351677 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
PTPN11-201ENST00000351677 DMRTA2Q96SC8 542 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 THSD7BQ9C0I4 1608 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 TCF20Q9UGU0 1960 aaKnown RBP13.34□□□□□ -0.27
PTPN11-201ENST00000351677 A0A1B0GV90 55 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 AMMECR1LQ6DCA0 310 aa13.34□□□□□ -0.27
PTPN11-201ENST00000351677 CLEC19AQ6UXS0 136 aa13.33□□□□□ -0.27
PTPN11-201ENST00000351677 CTAG1AP78358 180 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 FAM19A2Q8N3H0 131 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 SMIM12Q96EX1 92 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 PGPEP1LA6NFU8 196 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 UBE2L6O14933 153 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 FABP2P12104 132 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 FAM159AQ6UWV7 190 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
PTPN11-201ENST00000351677 SPTBN2O15020 2390 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 ZNF581Q9P0T4 197 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 M0R381 172 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 SELLP14151 372 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 RAXQ9Y2V3 346 aa13.33□□□□□ -0.28
PTPN11-201ENST00000351677 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
PTPN11-201ENST00000351677 TMEM238LA0A1B0GVL6 79 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 A6NJY4 79 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 C19orf54Q5BKX5 351 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 FMC1Q96HJ9 113 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 TMEM136Q6ZRR5 245 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 RAX2Q96IS3 184 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 MIEN1Q9BRT3 115 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 TMEM70Q9BUB7 260 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 MPDZO75970 2070 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 C9JCJ5 164 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 FAM166AQ6J272 317 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 C14orf144Q96I85 54 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 PRELID3AQ96N28 172 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 APOHP02749 345 aaPredicted RBP13.32□□□□□ -0.28
PTPN11-201ENST00000351677 STAG3L2P0CL84 134 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 PYYP10082 97 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 GSN-AS1Q9NRJ2 163 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 NAPSAO96009 420 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 IGHV1-46P01743 117 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 HOXA5P20719 270 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 LRTM2Q8N967 370 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 CYTL1Q9NRR1 136 aa13.32□□□□□ -0.28
PTPN11-201ENST00000351677 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
PTPN11-201ENST00000351677 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.31□□□□□ -0.28
PTPN11-201ENST00000351677 A1L4Q6 167 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 SNRPD3P62318 126 aaKnown RBP13.31□□□□□ -0.28
PTPN11-201ENST00000351677 TMEM133Q9H2Q1 129 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 A0A1B0GUT8 65 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 LILRA1O75019 489 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 HIGD1CA8MV81 97 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 PSPNO60542 156 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 TUBA4BQ9H853 241 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 TMEM160Q9NX00 188 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 IL18BPO95998 194 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 ST6GALNAC6Q969X2 333 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 RFNGQ9Y644 331 aa13.31□□□□□ -0.28
PTPN11-201ENST00000351677 PRSS2P07478 247 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 PRSS8Q16651 343 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 OR10W1Q8NGF6 305 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 TSPOP30536 169 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 K7ERU9 68 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 SNAI2O43623 268 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 PRB4P10163 310 aaPredicted RBP13.3□□□□□ -0.28
PTPN11-201ENST00000351677 LGALS3P17931 250 aaKnown RBP13.3□□□□□ -0.28
PTPN11-201ENST00000351677 NBR2O15453 112 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 ZNF414Q96IQ9 312 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 IZUMO1RA6ND01 250 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
PTPN11-201ENST00000351677 CD69Q07108 199 aa13.3□□□□□ -0.28
PTPN11-201ENST00000351677 LHFPL4Q7Z7J7 247 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 RNASE6Q93091 150 aaKnown RBP13.29□□□□□ -0.28
PTPN11-201ENST00000351677 IGHV3-11P01762 117 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 ADMP35318 185 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 FHL1Q13642 323 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 EFNB3Q15768 340 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 KIR2DL4Q99706 377 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 FAM168AQ92567 244 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
PTPN11-201ENST00000351677 TAS2R60P59551 318 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 QRFPP83859 136 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 SMAGPQ0VAQ4 97 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 ST6GALNAC3Q8NDV1 305 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
PTPN11-201ENST00000351677 SERF1AO75920 110 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms