RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 C19orf84I3L1E1 186 aa16.37■□□□□ 0.21
CHRNA3-202ENST00000348639 CXCL1P09341 107 aa16.37■□□□□ 0.21
CHRNA3-202ENST00000348639 MT-CO2P00403 227 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 PSG5Q15238 335 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 FAM78BQ5VT40 261 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 OR51G1Q8NGK1 321 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 OR2T6Q8NHC8 308 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 C19orf24Q9BVV8 132 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 SSBP3Q9BWW4 388 aaPredicted RBP16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 FUT9Q9Y231 359 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 SIGLEC9Q9Y336 463 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 CLN5O75503 358 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 VENTXO95231 258 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 CNTFRP26992 372 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 GNB1P62873 340 aa16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 MRPL41Q8IXM3 137 aaKnown RBP16.36■□□□□ 0.21
CHRNA3-202ENST00000348639 LOC105371242A0A075B767 164 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 TGIF2-C20orf24A0A0A6YYL0 155 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 M0R1W7 72 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 NDUFS7O75251 213 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 RPS10P46783 165 aaKnown RBP16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 OR11H6Q8NGC7 330 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 FNDC4Q9H6D8 234 aaPredicted RBP16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 IGLC7A0M8Q6 106 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 FOXH1O75593 365 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 ACTL6BO94805 426 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 ARF6P62330 175 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 MIR17HGQ75NE6 70 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 ACY3Q96HD9 319 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 RNF5Q99942 180 aa16.35■□□□□ 0.21
CHRNA3-202ENST00000348639 GATA2P23769 480 aaPredicted RBP16.34■□□□□ 0.21
CHRNA3-202ENST00000348639 RPL27AP46776 148 aaKnown RBP16.34■□□□□ 0.21
CHRNA3-202ENST00000348639 TNXAQ16473 311 aa16.34■□□□□ 0.21
CHRNA3-202ENST00000348639 PVRIGQ6DKI7 326 aa16.34■□□□□ 0.21
CHRNA3-202ENST00000348639 DOK5Q9P104 306 aa16.34■□□□□ 0.21
CHRNA3-202ENST00000348639 ARHGAP32A7KAX9 2087 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 NDUFB4O95168 129 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 S100A6P06703 90 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 OR5G3P0C626 314 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 COMPP49747 757 aaPredicted RBP16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 TPTE2P1Q5T6R2 138 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 PPP1R27Q86WC6 154 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 ZNF114Q8NC26 417 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 SSX3Q99909 188 aa16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 METTL1Q9UBP6 276 aaKnown RBP16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 YTHDF2Q9Y5A9 579 aaKnown RBP16.33■□□□□ 0.21
CHRNA3-202ENST00000348639 C5orf52A6NGY3 159 aa16.33■□□□□ 0.2
CHRNA3-202ENST00000348639 HTR1DP28221 377 aa16.33■□□□□ 0.2
CHRNA3-202ENST00000348639 SNRPEP62304 92 aaKnown RBP16.33■□□□□ 0.2
CHRNA3-202ENST00000348639 KIAA0141Q14154 515 aaPredicted RBP16.33■□□□□ 0.2
CHRNA3-202ENST00000348639 TECRQ9NZ01 308 aaKnown RBP16.33■□□□□ 0.2
CHRNA3-202ENST00000348639 USP24Q9UPU5 2620 aa16.32■□□□□ 0.2
CHRNA3-202ENST00000348639 REG1AP05451 166 aa16.32■□□□□ 0.2
CHRNA3-202ENST00000348639 LDLRAD2Q5SZI1 272 aa16.32■□□□□ 0.2
CHRNA3-202ENST00000348639 C16orf82Q7Z2V1 217 aa16.32■□□□□ 0.2
CHRNA3-202ENST00000348639 DPM3Q9P2X0 92 aa16.32■□□□□ 0.2
CHRNA3-202ENST00000348639 PRTN3P24158 256 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 GPR6P46095 362 aaPredicted RBP16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 THAP8Q8NA92 274 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 NPIPB3Q92617 1050 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 TMEM167BQ9NRX6 74 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 ARL2-SNX15V9GYD0 113 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 TRBV24-1A0A075B6N3 115 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 A6NNC1 897 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 PQLC2Q6ZP29 291 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 ANAPC16Q96DE5 110 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 FAM210BQ96KR6 192 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 DERL1Q9BUN8 251 aa16.31■□□□□ 0.2
CHRNA3-202ENST00000348639 CFAP46Q8IYW2 2715 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 PSMB11A5LHX3 300 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 TIMM23O14925 209 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 TAS2R45P59539 299 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 SSBP2P81877 361 aaPredicted RBP16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 ETFRF1Q6IPR1 90 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 TMEM37Q8WXS4 190 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 RNF2Q99496 336 aa16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 ASH1LQ9NR48 2969 aaKnown RBP16.3■□□□□ 0.2
CHRNA3-202ENST00000348639 TCRBV4S1A1TA0A5B7 111 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 AREGP15514 252 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 CEACAM3P40198 252 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 AKR1D1P51857 326 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 HCP5Q6MZN7 132 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 C1orf122Q6ZSJ8 110 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 LINC01551Q86U37 167 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 MRPL32Q9BYC8 188 aaKnown RBP16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 FBXL15Q9H469 300 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 IGKV1D-37A0A075B6S9 117 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 SCO2A0A1W2PP80 73 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 ODF3BA8MYP8 253 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 H7BYZ3 331 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 IGHV2-5P01817 119 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 CRYGCP07315 174 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 PFN1P07737 140 aaKnown RBP16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 ZNF503Q96F45 646 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 SLC25A33Q9BSK2 321 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 DNAJC4Q9NNZ3 241 aa16.29■□□□□ 0.2
CHRNA3-202ENST00000348639 UBE2CO00762 179 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 PLXNB1O43157 2135 aa16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 RPL35P42766 123 aaKnown RBP16.28■□□□□ 0.2
CHRNA3-202ENST00000348639 MFAP2P55001 183 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms