RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TICRRQ7Z2Z1 1910 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF318Q5VUA4 2279 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 TMSB15BA0A087X1C1 80 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
CLCN6-202ENST00000346436 SAPCD1Q5SSQ6 148 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 H3BUX3 64 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 PSPNO60542 156 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 OR2D3Q8NGH3 330 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 PAM16Q9Y3D7 125 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 KLHL30-AS1Q8NEE0 82 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
CLCN6-202ENST00000346436 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 PXMP4Q9Y6I8 212 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 COLCA2A8K830 154 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 TWIST1Q15672 202 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 PARLQ9H300 379 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 VSIRQ9H7M9 311 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 C9JQL5 133 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
CLCN6-202ENST00000346436 PKIAP61925 76 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 TFF3Q07654 80 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 SRSF7Q16629 238 aaKnown RBP eCLIP9.06□□□□□ -0.964e-7■■■■□ 26.7
CLCN6-202ENST00000346436 DNAJC4Q9NNZ3 241 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 KIAA2026Q5HYC2 2103 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 WIPF3A6NGB9 483 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
CLCN6-202ENST00000346436 CD55P08174 381 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 AGAP20933 346 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 LYNX1G3V0Z9 82 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 IGHV1-46P01743 117 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 LYNX1P0DP58 116 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 UCP1P25874 307 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 VMO1Q7Z5L0 202 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 OR5AU1Q8NGC0 362 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 MRPL32Q9BYC8 188 aaKnown RBP9.06□□□□□ -0.96
CLCN6-202ENST00000346436 PPP1R17O96001 155 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 GCGP01275 180 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
CLCN6-202ENST00000346436 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 C3orf36Q3SXR2 165 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 KIR2DL4Q99706 377 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
CLCN6-202ENST00000346436 TCF19Q9Y242 345 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
CLCN6-202ENST00000346436 TRGV4A0A0C4DH28 118 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 A8MWL6 223 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 HGFACQ04756 655 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 PEAR1Q5VY43 1037 aaPredicted RBP9.05□□□□□ -0.96
CLCN6-202ENST00000346436 PLPPR1Q8TBJ4 325 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 FER1L5A0AVI2 2057 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 ESPL1Q14674 2120 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 J3QR89 54 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 KCNS1Q96KK3 526 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF253O75346 499 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 IGHV3-48P01763 117 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 OR9G9P0C7N8 305 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 FOXF2Q12947 444 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 ICAM4Q14773 271 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 OR1P1Q8NH06 330 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 BPESC1Q9GZL8 116 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 TRBV6-7A0A0A0MS04 114 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 C17orf98A8MV24 154 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 PLAUP00749 431 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 FOXL1Q12952 345 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 FAM201AQ5SY85 155 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 MBNL2Q5VZF2 373 aaKnown RBP9.05□□□□□ -0.96
CLCN6-202ENST00000346436 GEMIN7Q9H840 131 aaKnown RBP9.05□□□□□ -0.96
CLCN6-202ENST00000346436 DOCK7Q96N67 2140 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
CLCN6-202ENST00000346436 REG1AP05451 166 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 ASIPP42127 132 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 RPL39P5Q59GN2 51 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 FAM74A4Q5TZK3 123 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 SRD5A3Q9H8P0 318 aa9.05□□□□□ -0.96
CLCN6-202ENST00000346436 LCN12Q6JVE5 192 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 TBX15Q96SF7 602 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 SDF2L1Q9HCN8 221 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 C12orf77C9JDV5 145 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 M0R3E3 92 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 HNRNPA3P51991 378 aaKnown RBP9.04□□□□□ -0.96
CLCN6-202ENST00000346436 ZNF600Q6ZNG1 722 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 Q71RC1 249 aaPredicted RBP9.04□□□□□ -0.96
CLCN6-202ENST00000346436 FAM110DQ8TAY7 271 aaPredicted RBP9.04□□□□□ -0.96
CLCN6-202ENST00000346436 A0A1B0GV90 55 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 GATAD1Q8WUU5 269 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 SLC50A1Q9BRV3 221 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 GPR179Q6PRD1 2367 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 IGHV3-35A0A0C4DH35 117 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 RAMP3O60896 148 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
CLCN6-202ENST00000346436 GFI1BQ5VTD9 330 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms