RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ITLN2Q8WWU7 325 aaPredicted RBP12.07□□□□□ -0.48
PBX3-201ENST00000342287 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 NRN1Q9NPD7 142 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 TRAV1-1A0A0B4J248 108 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 HBZP02008 142 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 AMTP48728 403 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 TMEM187Q14656 261 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 TCF24Q7RTU0 167 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 OR13A1Q8NGR1 328 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 PLEKHF2Q9H8W4 249 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 TP73-AS1Q9UF72 201 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 RELNP78509 3460 aa12.07□□□□□ -0.48
PBX3-201ENST00000342287 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 ZNF253O75346 499 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 NXPH3O95157 252 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 CBLN1P23435 193 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 RELBQ01201 579 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 PNKDQ8N490 385 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 CCL17Q92583 94 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 SPINT2O43291 252 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 RAMP3O60896 148 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 GPX1P07203 203 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 TBC1D26Q86UD7 250 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 OR5B3Q8NH48 314 aa12.06□□□□□ -0.48
PBX3-201ENST00000342287 DIDO1Q9BTC0 2240 aaKnown RBP12.05□□□□□ -0.48
PBX3-201ENST00000342287 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 PHF1O43189 567 aaPredicted RBP12.05□□□□□ -0.48
PBX3-201ENST00000342287 IFNA1P01562 189 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 CR1LQ2VPA4 569 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 ZNF788Q6ZQV5 615 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 NINJ1Q92982 152 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 CCL13Q99616 98 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 FAM234AQ9H0X4 552 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 EDDM3BP56851 147 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 ODF1Q14990 250 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 ZNF726P1Q15940 193 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 KIAA1644Q3SXP7 199 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 GAFA1Q96PS6 74 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
PBX3-201ENST00000342287 MEF2BQ02080 365 aaPredicted RBP12.04□□□□□ -0.48
PBX3-201ENST00000342287 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
PBX3-201ENST00000342287 LCN12Q6JVE5 192 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 MSI2Q96DH6 328 aaKnown RBP12.04□□□□□ -0.48
PBX3-201ENST00000342287 DCTN5Q9BTE1 182 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 KALRNO60229 2985 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 CACNA1DQ01668 2161 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 C15orf65H3BRN8 121 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 HMGB3O15347 200 aaKnown RBP12.04□□□□□ -0.48
PBX3-201ENST00000342287 PGLYRP1O75594 196 aaPredicted RBP12.04□□□□□ -0.48
PBX3-201ENST00000342287 NUDT3O95989 172 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 SSTR5P35346 364 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 ST6GALNAC6Q969X2 333 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 TMEM222Q9H0R3 208 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 ROS1P08922 2347 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 DYSFO75923 2080 aa12.04□□□□□ -0.48
PBX3-201ENST00000342287 MUC21A0A0G2JKD1 596 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 MUC21A0A140T8X8 626 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 WNT2P09544 360 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 C3orf79P0CE67 100 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 HTD2P86397 168 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 MUC21Q5SSG8 566 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 OR4F5Q8NH21 305 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 SGMS2Q8NHU3 365 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 RFESDQ8TAC1 157 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 UBE2J1Q9Y385 318 aaPredicted RBP12.03□□□□□ -0.48
PBX3-201ENST00000342287 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
PBX3-201ENST00000342287 GAGE10A6NGK3 116 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 C18orf12Q96KH6 178 aa12.03□□□□□ -0.48
PBX3-201ENST00000342287 IGLC1P0CG04 106 aa12.02□□□□□ -0.48
PBX3-201ENST00000342287 SIGMAR1Q99720 223 aa12.02□□□□□ -0.48
PBX3-201ENST00000342287 HCFC1P51610 2035 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 TMPRSS2O15393 492 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 PPOXP50336 477 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 BAXQ07812 192 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 DUX4L9Q6RFH8 374 aaPredicted RBP12.02□□□□□ -0.49
PBX3-201ENST00000342287 FAM216BQ8N7L0 139 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 MRPL18Q9H0U6 180 aaKnown RBP12.02□□□□□ -0.49
PBX3-201ENST00000342287 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 THYN1Q9P016 225 aa12.02□□□□□ -0.49
PBX3-201ENST00000342287 F2RP25116 425 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 GPR6P46095 362 aaPredicted RBP12.01□□□□□ -0.49
PBX3-201ENST00000342287 OR4P4Q8NGL7 312 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 LHX4Q969G2 390 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 GPHA2Q96T91 129 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 CHRDL1Q9BU40 450 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 KCNS2Q9ULS6 477 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 H0Y980 276 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 J3KRW8 73 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 IFNA5P01569 189 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
PBX3-201ENST00000342287 HIVEP3Q5T1R4 2406 aa12.01□□□□□ -0.49
PBX3-201ENST00000342287 TRGV10A0A0A0MS01 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms