RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TMEM200BQ69YZ2 307 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 ZNF788Q6ZQV5 615 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 OR10G4Q8NGN3 311 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 TIMD4Q96H15 378 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 PCGF1Q9BSM1 259 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 AURKAIP1Q9NWT8 199 aaPredicted RBP10.71□□□□□ -0.7
COL18A1-201ENST00000342220 HILPDAQ9Y5L2 63 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 LCN2P80188 198 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 ZNF645Q8N7E2 425 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 OR5T1Q8NG75 326 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 VN1R17PQ8TDU5 208 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 ORAOV1Q8WV07 137 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 MBD3L1Q8WWY6 194 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 PERPQ96FX8 193 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 KBTBD11-OT1A0A1B0GTJ5 212 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 BMI1P35226 326 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 ADIRFQ15847 76 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 CT45A1Q5HYN5 189 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM256Q8N2U0 113 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 CT45A3Q8NHU0 189 aa10.7□□□□□ -0.7
COL18A1-201ENST00000342220 NPIPB11E5RHQ5 1161 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 HMGB3O15347 200 aaKnown RBP10.69□□□□□ -0.7
COL18A1-201ENST00000342220 ERVK-16P61578 105 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 HBG1P69891 147 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 HBG2P69892 147 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 ZNF709Q8N972 641 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 MAPK1IP1LQ8NDC0 245 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 C20orf144Q9BQM9 153 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 PSMG3Q9BT73 122 aaPredicted RBP10.69□□□□□ -0.7
COL18A1-201ENST00000342220 WDR61Q9GZS3 305 aaKnown RBP10.69□□□□□ -0.7
COL18A1-201ENST00000342220 MAP1LC3B2A6NCE7 125 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 LHBP01229 141 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 HIST2H2BCQ6DN03 193 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 C5orf30Q96GV9 206 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 MAP1LC3BQ9GZQ8 125 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 RBKSQ9H477 322 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 SAA2-SAA4A0A096LPE2 208 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 IGHV3-48P01763 117 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 SAA2P0DJI9 122 aaPredicted RBP10.69□□□□□ -0.7
COL18A1-201ENST00000342220 HES1Q14469 280 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 MOB3BQ86TA1 216 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 OR4A16Q8NH70 328 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 ZNF430Q9H8G1 570 aaPredicted RBP10.69□□□□□ -0.7
COL18A1-201ENST00000342220 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
COL18A1-201ENST00000342220 WNT2P09544 360 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 GPR6P46095 362 aaPredicted RBP10.68□□□□□ -0.7
COL18A1-201ENST00000342220 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 GNB1P62873 340 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 SLC38A11Q08AI6 406 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 FBLN7Q53RD9 439 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM41BQ5BJD5 291 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 TAF15Q92804 592 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL18A1-201ENST00000342220 TXN2Q99757 166 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 HEYLQ9NQ87 328 aaPredicted RBP10.68□□□□□ -0.7
COL18A1-201ENST00000342220 TRAV3A0A0B4J244 114 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 PIGBOS1A0A0B4J2F0 54 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 IGKV1D-33P01593 117 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 IGKV1-33P01594 117 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 ADH4P08319 380 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 VAMP3Q15836 100 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 C16orf82Q7Z2V1 217 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 ZNF738Q8NE65 137 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM170AQ8WVE7 144 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 RAB1CQ92928 201 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 OR5B12Q96R08 314 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 PRRC2AP48634 2157 aaKnown RBP10.68□□□□□ -0.7
COL18A1-201ENST00000342220 PPIAL4CA0A0B4J2A2 164 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 RNF212BA8MTL3 300 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 C15orf65H3BRN8 121 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 PPIAL4GP0DN37 164 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 SERF2P84101 59 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 PNRC1Q12796 327 aaPredicted RBP10.68□□□□□ -0.7
COL18A1-201ENST00000342220 KLRD1Q13241 179 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 C17orf58Q2M2W7 97 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
COL18A1-201ENST00000342220 IDI2-AS1Q9NZ38 188 aa10.68□□□□□ -0.7
COL18A1-201ENST00000342220 NUPR1O60356 82 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 HINT1P49773 126 aaPredicted RBP10.67□□□□□ -0.7
COL18A1-201ENST00000342220 PDLIM4P50479 330 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
COL18A1-201ENST00000342220 RANP62826 216 aaKnown RBP10.67□□□□□ -0.7
COL18A1-201ENST00000342220 PNKDQ8N490 385 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 LHX4Q969G2 390 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 GATA4P43694 442 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 PLGLAQ15195 96 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 LHFPL4Q7Z7J7 247 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
COL18A1-201ENST00000342220 GALR1P47211 349 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 C1orf229Q6ZS94 237 aaPredicted RBP10.66□□□□□ -0.7
COL18A1-201ENST00000342220 ABHD12Q8N2K0 398 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 TNFRSF14Q92956 283 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM242Q9NWH2 141 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 IGKV1-16P04430 117 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 UBE2G2P60604 165 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 Q6ZN92 141 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 OR8B3Q8NGG8 313 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms