RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.74
SSX2IP-201ENST00000342203 TRAV9-1A0A075B6T8 112 aa10.46□□□□□ -0.74
SSX2IP-201ENST00000342203 SLC25A17O43808 307 aa10.46□□□□□ -0.74
SSX2IP-201ENST00000342203 ASPHD1Q5U4P2 390 aa10.46□□□□□ -0.74
SSX2IP-201ENST00000342203 CHRNA10Q9GZZ6 450 aa10.46□□□□□ -0.74
SSX2IP-201ENST00000342203 TRAV5A0A0B4J249 113 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 LOC107984156A0A0G2JMH3 177 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 ZNF716A6NP11 495 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PEX7O00628 323 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 ACP1P24666 158 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 LGALS4P56470 323 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 ARL17AQ8IVW1 177 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 RASL11BQ9BPW5 248 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PRR14LQ5THK1 2151 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PSPNO60542 156 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PLA2G5P39877 138 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PSG7Q13046 419 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 HAPLN4Q86UW8 402 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 SMRP1Q8NCR6 262 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 ITLN1Q8WWA0 313 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 OSTCQ9NRP0 149 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 FREM1Q5H8C1 2179 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 ZNF138P52744 262 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 RSPO1Q2MKA7 263 aaPredicted RBP10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PTGDSP41222 190 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 LRRC10Q5BKY1 277 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 LINC00305Q7Z4B0 112 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 LYPD6Q86Y78 171 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 PLXNB3Q9ULL4 1909 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 LINC00479Q96M42 142 aa10.45□□□□□ -0.74
SSX2IP-201ENST00000342203 RPL7P18124 248 aaKnown RBP10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 ZNF497Q6ZNH5 498 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 RPEQ96AT9 228 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 TRAV3A0A0B4J244 114 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 SH2D7A6NKC9 451 aaPredicted RBP10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 IGLC2P0DOY2 106 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 IGLC3P0DOY3 106 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 TNFRSF1AP19438 455 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 NTF4P34130 210 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 TWIST1Q15672 202 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 INO80CQ6PI98 192 aaPredicted RBP10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 RNF7Q9UBF6 113 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 A0A1W2PS18 150 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 IGKV1-39P01597 117 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 IGKV1D-39P04432 117 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 NBEAP1P0C6P0 100 aa10.44□□□□□ -0.74
SSX2IP-201ENST00000342203 MYOD1P15172 320 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 FOXF2Q12947 444 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 OR10J3Q5JRS4 329 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 TMEM42Q69YG0 159 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 MGST2Q99735 147 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 COL4A3Q01955 1670 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 DLL1O00548 723 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 SELENOTP62341 195 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 SNRNP40Q96DI7 357 aaKnown RBP10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 ARRDC1-AS1Q9H2J1 176 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 HIGD1AQ9Y241 93 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 FAM181BA6NEQ2 426 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 XIRP2A4UGR9 3374 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 TMEM265A0A087WTH1 108 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 OR2T8A6NH00 312 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 CRYABP02511 175 aaKnown RBP10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 MBNL2Q5VZF2 373 aaKnown RBP10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 SFTA2Q6UW10 78 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 JPT1Q9UK76 154 aa10.43□□□□□ -0.74
SSX2IP-201ENST00000342203 A0A1W2PRE2 83 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 DEFB109BQ30KR1 87 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 RALYQ9UKM9 306 aaKnown RBP10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 PCNX3Q9H6A9 2034 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 ACP7Q6ZNF0 438 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 SFXN3Q9BWM7 321 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 KLK15Q9H2R5 256 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 GAGE12BA1L429 117 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 LINC00473A8K010 186 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 C15orf62A8K5M9 175 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 ZNF414Q96IQ9 312 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 CDH23Q9H251 3354 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 IGLV3-12A0A075B6K2 115 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 IGLV3-32A0A0A0MS00 114 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 LINC00271P0C7V0 271 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 CEACAM8P31997 349 aaPredicted RBP10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 IMMP1LQ96LU5 166 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 IFI27L2Q9H2X8 130 aa10.42□□□□□ -0.74
SSX2IP-201ENST00000342203 TYMSP04818 313 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms