RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 VAX2Q9UIW0 290 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 TNFSF18Q9UNG2 199 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 H0YJW9 148 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 J3QRE1 110 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 CD8AP01732 235 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 TWIST1Q15672 202 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 RBM38Q9H0Z9 239 aaKnown RBP10.49□□□□□ -0.73
LIN54-201ENST00000340417 FBLN5Q9UBX5 448 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 TCL1AP56279 114 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 FAM89BQ8N5H3 189 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 SAV1Q9H4B6 383 aaPredicted RBP10.49□□□□□ -0.73
LIN54-201ENST00000340417 NPDC1Q9NQX5 325 aaPredicted RBP10.49□□□□□ -0.73
LIN54-201ENST00000340417 OR5AC2Q9NZP5 309 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 SNRNP200O75643 2136 aaKnown RBP10.49□□□□□ -0.73
LIN54-201ENST00000340417 PVRIGQ6DKI7 326 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 KIR3DL3Q8N743 410 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 PTPRSQ13332 1948 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 FAM223BA6NKX1 122 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 FAM223AQ8IWN6 122 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 NHLRC2Q8NBF2 726 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 GATAD1Q8WUU5 269 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 ZNF524Q96C55 264 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 PEF1Q9UBV8 284 aaKnown RBP10.49□□□□□ -0.73
LIN54-201ENST00000340417 RBFOX3A6NFN3 312 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 C9JCJ5 164 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 OR10C1Q96KK4 312 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 SCGB1D1O95968 90 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 LOXP28300 417 aaPredicted RBP10.48□□□□□ -0.73
LIN54-201ENST00000340417 AMTP48728 403 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 ICAM4Q14773 271 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 TEX36Q5VZQ5 186 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
LIN54-201ENST00000340417 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 PHF3Q92576 2039 aaKnown RBP10.48□□□□□ -0.73
LIN54-201ENST00000340417 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 HLA-DRB1P01911 266 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 C2orf68Q2NKX9 166 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 TEX50A0A1B0GTY4 177 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 LINC01619G3V211 115 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 CD5P06127 495 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 IGFBP2P18065 325 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 C10orf55Q5SWW7 151 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 FAM74A4Q5TZK3 123 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 NCOR2Q9Y618 2525 aa10.48□□□□□ -0.73
LIN54-201ENST00000340417 ANOS1P23352 680 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 GLMPQ8WWB7 406 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 GALNT14Q96FL9 552 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 NXF2Q9GZY0 626 aaKnown RBP10.47□□□□□ -0.73
LIN54-201ENST00000340417 SHISA3A0PJX4 238 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 CXCL3P19876 107 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 A0A0A6YYD4 124 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 GPX4P36969 197 aaPredicted RBP10.47□□□□□ -0.73
LIN54-201ENST00000340417 SPSB3Q6PJ21 355 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 GOLT1AQ6ZVE7 132 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 GTF3C1Q12789 2109 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 FAM53AQ6NSI3 398 aaPredicted RBP10.47□□□□□ -0.73
LIN54-201ENST00000340417 DPPA3Q6W0C5 159 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 WISP2O76076 250 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 SFTA3P0C7M3 94 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 LRRC75A-AS1Q8N1F1 130 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 RNF125Q96EQ8 232 aa10.47□□□□□ -0.73
LIN54-201ENST00000340417 NOL4LQ96MY1 436 aaPredicted RBP10.47□□□□□ -0.73
LIN54-201ENST00000340417 LOC102723971A0A1B0GUV8 181 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 OR11H12B2RN74 326 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.73
LIN54-201ENST00000340417 PRCDQ00LT1 54 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 SLC7A5P1Q8MH63 180 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 NOTCH2Q04721 2471 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 A0A1B0GUS0 222 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.73
LIN54-201ENST00000340417 SYNJ2BPP57105 145 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 DUX4L9Q6RFH8 374 aaPredicted RBP10.46□□□□□ -0.73
LIN54-201ENST00000340417 OR10G8Q8NGN5 311 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 DLX1P56177 255 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 ZNF56Q15929 161 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 C11orf91Q3C1V1 193 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 FAM71F2Q6NXP2 309 aa10.46□□□□□ -0.73
LIN54-201ENST00000340417 SNCGO76070 127 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 IGHV4-59P01825 116 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 LEPP41159 167 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 LEMD1Q68G75 181 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 OR10W1Q8NGF6 305 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 PHYHIPLQ96FC7 376 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 GGACTQ9BVM4 153 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 LCN12Q6JVE5 192 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 ZNF680Q8NEM1 530 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 SLC35B3Q9H1N7 401 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 SIGLEC9Q9Y336 463 aa10.46□□□□□ -0.74
LIN54-201ENST00000340417 KLHDC1Q8N7A1 406 aa10.45□□□□□ -0.74
LIN54-201ENST00000340417 NAT8Q9UHE5 227 aa10.45□□□□□ -0.74
LIN54-201ENST00000340417 SCN8AQ9UQD0 1980 aa10.45□□□□□ -0.74
LIN54-201ENST00000340417 BTN1A1Q13410 526 aa10.45□□□□□ -0.74
LIN54-201ENST00000340417 KLF17Q5JT82 389 aaPredicted RBP10.45□□□□□ -0.74
LIN54-201ENST00000340417 CACNA1DQ01668 2161 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms