RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
RET-201ENST00000340058 VKORC1Q9BQB6 163 aa12.16□□□□□ -0.46
RET-201ENST00000340058 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
RET-201ENST00000340058 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.46
RET-201ENST00000340058 BPIFA4PQ86YQ2 179 aa12.15□□□□□ -0.46
RET-201ENST00000340058 NEU1Q99519 415 aa12.15□□□□□ -0.46
RET-201ENST00000340058 RPUSD1Q9UJJ7 312 aaKnown RBP12.15□□□□□ -0.46
RET-201ENST00000340058 PITPNC1Q9UKF7 332 aa12.15□□□□□ -0.46
RET-201ENST00000340058 CARHSP1Q9Y2V2 147 aaKnown RBP12.15□□□□□ -0.46
RET-201ENST00000340058 PYYP10082 97 aa12.15□□□□□ -0.46
RET-201ENST00000340058 KLRD1Q13241 179 aa12.15□□□□□ -0.46
RET-201ENST00000340058 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
RET-201ENST00000340058 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.15□□□□□ -0.46
RET-201ENST00000340058 TMEM208Q9BTX3 173 aa12.15□□□□□ -0.46
RET-201ENST00000340058 DKK1O94907 266 aa12.15□□□□□ -0.46
RET-201ENST00000340058 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
RET-201ENST00000340058 C1QTNF9P0C862 333 aa12.15□□□□□ -0.46
RET-201ENST00000340058 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
RET-201ENST00000340058 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
RET-201ENST00000340058 NHLH1Q02575 133 aa12.15□□□□□ -0.46
RET-201ENST00000340058 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
RET-201ENST00000340058 RPP25LQ8N5L8 163 aaKnown RBP12.15□□□□□ -0.46
RET-201ENST00000340058 TMEM200BQ69YZ2 307 aa12.14□□□□□ -0.47
RET-201ENST00000340058 DNM1P46Q6ZS02 220 aa12.14□□□□□ -0.47
RET-201ENST00000340058 CYP2G1PQ6ZSU1 146 aa12.14□□□□□ -0.47
RET-201ENST00000340058 OBSL1O75147 1896 aa12.14□□□□□ -0.47
RET-201ENST00000340058 UPK2O00526 184 aa12.14□□□□□ -0.47
RET-201ENST00000340058 TNFSF13O75888 250 aa12.14□□□□□ -0.47
RET-201ENST00000340058 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
RET-201ENST00000340058 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
RET-201ENST00000340058 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
RET-201ENST00000340058 GSX1Q9H4S2 264 aaPredicted RBP12.14□□□□□ -0.47
RET-201ENST00000340058 AUP1Q9Y679 476 aa12.14□□□□□ -0.47
RET-201ENST00000340058 C9JQL5 133 aa12.14□□□□□ -0.47
RET-201ENST00000340058 TM4SF5O14894 197 aa12.14□□□□□ -0.47
RET-201ENST00000340058 TIMM23O14925 209 aa12.14□□□□□ -0.47
RET-201ENST00000340058 APCSP02743 223 aa12.14□□□□□ -0.47
RET-201ENST00000340058 GBGT1Q8N5D6 347 aa12.14□□□□□ -0.47
RET-201ENST00000340058 SLC25A33Q9BSK2 321 aa12.14□□□□□ -0.47
RET-201ENST00000340058 REG4Q9BYZ8 158 aa12.14□□□□□ -0.47
RET-201ENST00000340058 A0A087X0M5 115 aa12.13□□□□□ -0.47
RET-201ENST00000340058 A0A1B0GX30 115 aa12.13□□□□□ -0.47
RET-201ENST00000340058 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
RET-201ENST00000340058 NBEAP1P0C6P0 100 aa12.13□□□□□ -0.47
RET-201ENST00000340058 MFAP4P55083 255 aa12.13□□□□□ -0.47
RET-201ENST00000340058 ZNF585BQ52M93 769 aa12.13□□□□□ -0.47
RET-201ENST00000340058 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
RET-201ENST00000340058 TRAV5A0A0B4J249 113 aa12.13□□□□□ -0.47
RET-201ENST00000340058 IGHV3-11P01762 117 aa12.13□□□□□ -0.47
RET-201ENST00000340058 COX6B1P14854 86 aa12.13□□□□□ -0.47
RET-201ENST00000340058 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
RET-201ENST00000340058 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
RET-201ENST00000340058 GRAMD2BQ96HH9 432 aa12.13□□□□□ -0.47
RET-201ENST00000340058 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
RET-201ENST00000340058 TMEM133Q9H2Q1 129 aa12.13□□□□□ -0.47
RET-201ENST00000340058 HSPB7Q9UBY9 170 aa12.13□□□□□ -0.47
RET-201ENST00000340058 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
RET-201ENST00000340058 NPIPB11E5RHQ5 1161 aa12.13□□□□□ -0.47
RET-201ENST00000340058 MBNL2Q5VZF2 373 aaKnown RBP12.13□□□□□ -0.47
RET-201ENST00000340058 ASCL4Q6XD76 172 aa12.13□□□□□ -0.47
RET-201ENST00000340058 LTBP2Q14767 1821 aa12.13□□□□□ -0.47
RET-201ENST00000340058 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
RET-201ENST00000340058 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
RET-201ENST00000340058 SLX1AQ9BQ83 275 aa12.13□□□□□ -0.47
RET-201ENST00000340058 GPR183P32249 361 aa12.12□□□□□ -0.47
RET-201ENST00000340058 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
RET-201ENST00000340058 GNG5P63218 68 aa12.12□□□□□ -0.47
RET-201ENST00000340058 OR5R1Q8NH85 324 aa12.12□□□□□ -0.47
RET-201ENST00000340058 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
RET-201ENST00000340058 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
RET-201ENST00000340058 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
RET-201ENST00000340058 MED12LQ86YW9 2145 aa12.12□□□□□ -0.47
RET-201ENST00000340058 BMPR1BO00238 502 aa12.12□□□□□ -0.47
RET-201ENST00000340058 COL8A2P25067 703 aa12.12□□□□□ -0.47
RET-201ENST00000340058 SFRP2Q96HF1 295 aa12.12□□□□□ -0.47
RET-201ENST00000340058 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
RET-201ENST00000340058 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
RET-201ENST00000340058 TBX15Q96SF7 602 aa12.11□□□□□ -0.47
RET-201ENST00000340058 FAM215AQ9Y5M1 114 aa12.11□□□□□ -0.47
RET-201ENST00000340058 CORTO00230 105 aa12.11□□□□□ -0.47
RET-201ENST00000340058 FGF23Q9GZV9 251 aaPredicted RBP12.11□□□□□ -0.47
RET-201ENST00000340058 A8MWL6 223 aa12.11□□□□□ -0.47
RET-201ENST00000340058 TMEM178BH3BS89 294 aa12.11□□□□□ -0.47
RET-201ENST00000340058 PRSS1P07477 247 aa12.11□□□□□ -0.47
RET-201ENST00000340058 TDGF1P13385 188 aa12.11□□□□□ -0.47
RET-201ENST00000340058 SRIP30626 198 aa12.11□□□□□ -0.47
RET-201ENST00000340058 TCF23Q7RTU1 214 aa12.11□□□□□ -0.47
RET-201ENST00000340058 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
RET-201ENST00000340058 OR8A1Q8NGG7 326 aa12.11□□□□□ -0.47
RET-201ENST00000340058 CCL19Q99731 98 aa12.11□□□□□ -0.47
RET-201ENST00000340058 RNASE7Q9H1E1 156 aaKnown RBP12.11□□□□□ -0.47
RET-201ENST00000340058 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
RET-201ENST00000340058 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
RET-201ENST00000340058 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
RET-201ENST00000340058 C16orf92Q96LL3 132 aa12.1□□□□□ -0.47
RET-201ENST00000340058 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
RET-201ENST00000340058 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
RET-201ENST00000340058 SMAD7O15105 426 aaKnown RBP12.1□□□□□ -0.47
RET-201ENST00000340058 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
RET-201ENST00000340058 GNLYP22749 145 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms