RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
RTN3-201ENST00000338850 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
RTN3-201ENST00000338850 RAI1Q7Z5J4 1906 aaPredicted RBP8.8□□□□□ -1
RTN3-201ENST00000338850 ZNF469Q96JG9 3925 aaPredicted RBP8.79□□□□□ -1
RTN3-201ENST00000338850 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
RTN3-201ENST00000338850 SAA2-SAA4A0A096LPE2 208 aa8.79□□□□□ -1
RTN3-201ENST00000338850 C16orf97H3BN30 126 aa8.79□□□□□ -1
RTN3-201ENST00000338850 UPK2O00526 184 aa8.79□□□□□ -1
RTN3-201ENST00000338850 SAA2P0DJI9 122 aaPredicted RBP8.79□□□□□ -1
RTN3-201ENST00000338850 GZMBP10144 247 aa8.79□□□□□ -1
RTN3-201ENST00000338850 LOXP28300 417 aaPredicted RBP8.79□□□□□ -1
RTN3-201ENST00000338850 ATP5G3P48201 142 aa8.79□□□□□ -1
RTN3-201ENST00000338850 ZNF134P52741 427 aa8.79□□□□□ -1
RTN3-201ENST00000338850 EDDM3BP56851 147 aa8.79□□□□□ -1
RTN3-201ENST00000338850 SSTP61278 116 aa8.79□□□□□ -1
RTN3-201ENST00000338850 MRPS11P82912 194 aaKnown RBP8.79□□□□□ -1
RTN3-201ENST00000338850 GAMTQ14353 236 aa8.79□□□□□ -1
RTN3-201ENST00000338850 EFNB3Q15768 340 aa8.79□□□□□ -1
RTN3-201ENST00000338850 IQCJQ1A5X6 159 aa8.79□□□□□ -1
RTN3-201ENST00000338850 ARSJQ5FYB0 599 aaPredicted RBP8.79□□□□□ -1
RTN3-201ENST00000338850 CT45A1Q5HYN5 189 aa8.79□□□□□ -1
RTN3-201ENST00000338850 FAM53AQ6NSI3 398 aaPredicted RBP8.79□□□□□ -1
RTN3-201ENST00000338850 C22orf34Q6ZV56 151 aa8.79□□□□□ -1
RTN3-201ENST00000338850 GBGT1Q8N5D6 347 aa8.79□□□□□ -1
RTN3-201ENST00000338850 TPRX1Q8N7U7 411 aa8.79□□□□□ -1
RTN3-201ENST00000338850 STPG3Q8N7X2 389 aa8.79□□□□□ -1
RTN3-201ENST00000338850 OR10G8Q8NGN5 311 aa8.79□□□□□ -1
RTN3-201ENST00000338850 CT45A3Q8NHU0 189 aa8.79□□□□□ -1
RTN3-201ENST00000338850 OSR1Q8TAX0 266 aaPredicted RBP8.79□□□□□ -1
RTN3-201ENST00000338850 CACNG8Q8WXS5 425 aa8.79□□□□□ -1
RTN3-201ENST00000338850 DCTN5Q9BTE1 182 aa8.79□□□□□ -1
RTN3-201ENST00000338850 IL36BQ9NZH7 164 aa8.79□□□□□ -1
RTN3-201ENST00000338850 RPUSD1Q9UJJ7 312 aaKnown RBP8.79□□□□□ -1
RTN3-201ENST00000338850 LINC00312Q9Y6C7 94 aa8.79□□□□□ -1
RTN3-201ENST00000338850 TRAV38-1A0A0B4J264 116 aa8.78□□□□□ -1
RTN3-201ENST00000338850 HMGB3O15347 200 aaKnown RBP8.78□□□□□ -1
RTN3-201ENST00000338850 NDUFB4O95168 129 aa8.78□□□□□ -1
RTN3-201ENST00000338850 MT-ND6P03923 174 aa8.78□□□□□ -1
RTN3-201ENST00000338850 OR5G3P0C626 314 aa8.78□□□□□ -1
RTN3-201ENST00000338850 GPX4P36969 197 aaPredicted RBP8.78□□□□□ -1
RTN3-201ENST00000338850 TAS2R45P59539 299 aa8.78□□□□□ -1
RTN3-201ENST00000338850 PAX2Q02962 417 aa8.78□□□□□ -1
RTN3-201ENST00000338850 RPL39P5Q59GN2 51 aa8.78□□□□□ -1
RTN3-201ENST00000338850 FAM78BQ5VT40 261 aa8.78□□□□□ -1
RTN3-201ENST00000338850 CST9LP1Q5W188 147 aa8.78□□□□□ -1
RTN3-201ENST00000338850 MIC13Q5XKP0 118 aa8.78□□□□□ -1
RTN3-201ENST00000338850 ZNF833PQ6ZTB9 187 aa8.78□□□□□ -1
RTN3-201ENST00000338850 TCF23Q7RTU1 214 aa8.78□□□□□ -1
RTN3-201ENST00000338850 MOGAT3Q86VF5 341 aa8.78□□□□□ -1
RTN3-201ENST00000338850 LINC00311Q8N616 119 aa8.78□□□□□ -1
RTN3-201ENST00000338850 ITLN1Q8WWA0 313 aa8.78□□□□□ -1
RTN3-201ENST00000338850 GAFA1Q96PS6 74 aa8.78□□□□□ -1
RTN3-201ENST00000338850 SMR3AQ99954 134 aa8.78□□□□□ -1
RTN3-201ENST00000338850 PLEKHA3Q9HB20 300 aa8.78□□□□□ -1
RTN3-201ENST00000338850 FUT9Q9Y231 359 aa8.78□□□□□ -1
RTN3-201ENST00000338850 TRBV20OR9-2A0A075B6H5 130 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 A0A1W2PRE2 83 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 hADV38S2A0JD32 116 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 NKX6-3A6NJ46 265 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 THBDP07204 575 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 LINC00869P0C866 280 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 PAFAH1B2P68402 229 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 TMEM177Q53S58 311 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 LRRC75A-AS1Q8N1F1 130 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 C14orf144Q96I85 54 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 ZNF714Q96N38 554 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 C2orf88Q9BSF0 95 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 GAL3ST2Q9H3Q3 398 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 UBTD1Q9HAC8 227 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 GCM1Q9NP62 436 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 OSTCQ9NRP0 149 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 TECRQ9NZ01 308 aaKnown RBP8.77□□□□□ -1.01
RTN3-201ENST00000338850 TRAPPC1Q9Y5R8 145 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 ROS1P08922 2347 aa8.77□□□□□ -1.01
RTN3-201ENST00000338850 TRAV3A0A0B4J244 114 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 IGHV3-64DA0A0J9YX35 117 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 A0A1W2PN81 502 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 A8MWP6 167 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 SLC31A2O15432 143 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 CA2P00918 260 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 IGHV1-46P01743 117 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 TNFRSF1AP19438 455 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 CHRNA7P36544 502 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 ZNF137PP52743 207 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 RAB4BP61018 213 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 TNFAIP6P98066 277 aaPredicted RBP8.76□□□□□ -1.01
RTN3-201ENST00000338850 Q0VG73 95 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 SPINK9Q5DT21 86 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 GCSAMLQ5JQS6 135 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 C9orf152Q5JTZ5 239 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 Q5PR19 223 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 CDPF1Q6NVV7 123 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 WDR73Q6P4I2 378 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 ABHD12Q8N2K0 398 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 NECAP1Q8NC96 275 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 ZNRF1Q8ND25 227 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 SGMS2Q8NHU3 365 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 VSTM2AQ8TAG5 236 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
RTN3-201ENST00000338850 CCL19Q99731 98 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms