RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
PARVB-201ENST00000338758 ZNF525Q8N782 197 aa11.75□□□□□ -0.53
PARVB-201ENST00000338758 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
PARVB-201ENST00000338758 C18orf12Q96KH6 178 aa11.75□□□□□ -0.53
PARVB-201ENST00000338758 PSG9Q00887 426 aa11.75□□□□□ -0.53
PARVB-201ENST00000338758 KIF26AQ9ULI4 1882 aaPredicted RBP11.74□□□□□ -0.53
PARVB-201ENST00000338758 Q6P435 159 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 BRD3OSQ6XYD6 125 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 TMEM116Q8NCL8 245 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 C12orf57Q99622 126 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 OR9G9P0C7N8 305 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 ID3Q02535 119 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 HIST1H1AQ02539 215 aaPredicted RBP11.74□□□□□ -0.53
PARVB-201ENST00000338758 TMEM177Q53S58 311 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 SP5Q6BEB4 398 aaPredicted RBP11.74□□□□□ -0.53
PARVB-201ENST00000338758 KLHDC1Q8N7A1 406 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 H0YIZ8 118 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 SNRPD3P62318 126 aaKnown RBP11.74□□□□□ -0.53
PARVB-201ENST00000338758 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
PARVB-201ENST00000338758 M0QZK8 103 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 GPX1P07203 203 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 PARLQ9H300 379 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
PARVB-201ENST00000338758 PLXND1Q9Y4D7 1925 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 M0R2Z0 102 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 TMEM219Q86XT9 240 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 ZNF503-AS2A6NEH8 195 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 CGAP01215 116 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 QRFPP83859 136 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 TWIST1Q15672 202 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 VAMP8Q9BV40 100 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 FOXI3A8MTJ6 420 aaPredicted RBP11.73□□□□□ -0.53
PARVB-201ENST00000338758 APCSP02743 223 aa11.73□□□□□ -0.53
PARVB-201ENST00000338758 AP4M1O00189 453 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 RHOGP84095 191 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 MAS1LP35410 378 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 OR10W1Q8NGF6 305 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 ARFGEF3Q5TH69 2177 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 CX3CL1P78423 397 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 SRSF7Q16629 238 aaKnown RBP eCLIP11.72□□□□□ -0.53
PARVB-201ENST00000338758 DCAF16Q9NXF7 216 aa11.72□□□□□ -0.53
PARVB-201ENST00000338758 PTTG1IPP53801 180 aa11.71□□□□□ -0.53
PARVB-201ENST00000338758 IQCJQ1A5X6 159 aa11.71□□□□□ -0.53
PARVB-201ENST00000338758 OR52E5Q8NH55 327 aa11.71□□□□□ -0.53
PARVB-201ENST00000338758 A0A1W2PNU3 283 aaPredicted RBP11.71□□□□□ -0.53
PARVB-201ENST00000338758 WNT2P09544 360 aa11.71□□□□□ -0.53
PARVB-201ENST00000338758 PRCDQ00LT1 54 aa11.71□□□□□ -0.53
PARVB-201ENST00000338758 TRAV34A0A0B4J273 112 aa11.71□□□□□ -0.54
PARVB-201ENST00000338758 SUPT4H1P63272 117 aaKnown RBP11.71□□□□□ -0.54
PARVB-201ENST00000338758 RRN3P1Q2M238 152 aa11.71□□□□□ -0.54
PARVB-201ENST00000338758 Q6ZR03 302 aa11.71□□□□□ -0.54
PARVB-201ENST00000338758 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
PARVB-201ENST00000338758 PHLDA3Q9Y5J5 127 aa11.71□□□□□ -0.54
PARVB-201ENST00000338758 IGHV1-3A0A0C4DH29 117 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 LINC00205P59089 165 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 CENPFP49454 3210 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 H3BUX3 64 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 MIR17HGQ75NE6 70 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.7□□□□□ -0.54
PARVB-201ENST00000338758 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
PARVB-201ENST00000338758 CD69Q07108 199 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 FREM1Q5H8C1 2179 aa11.7□□□□□ -0.54
PARVB-201ENST00000338758 TMEM250H0YL14 139 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 RNF224P0DH78 156 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 TSPOP30536 169 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 PGLYRP4Q96LB8 373 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 LOC389332A0A1B0GUA5 103 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 ANOS1P23352 680 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 RSPO1Q2MKA7 263 aaPredicted RBP11.69□□□□□ -0.54
PARVB-201ENST00000338758 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 LTBP2Q14767 1821 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
PARVB-201ENST00000338758 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 ZNF343Q6P1L6 599 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 LHFPL5Q8TAF8 219 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 TEX50A0A1B0GTY4 177 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 JMJD8Q96S16 334 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 ELOVL1Q9BW60 279 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 BET1LQ9NYM9 111 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 NAV2Q8IVL1 2488 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 ASCL4Q6XD76 172 aa11.69□□□□□ -0.54
PARVB-201ENST00000338758 PRSS8Q16651 343 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 SMUG1Q53HV7 270 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 AGAP20933 346 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 Q6ZN92 141 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 SLC25A48Q6ZT89 311 aaKnown RBP11.68□□□□□ -0.54
PARVB-201ENST00000338758 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 OR4D5Q8NGN0 318 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 TRBV6-6A0A0A6YYG2 114 aa11.68□□□□□ -0.54
PARVB-201ENST00000338758 A6NNC1 897 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms