RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 PRSS8Q16651 343 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 LHFPL4Q7Z7J7 247 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 PARLQ9H300 379 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 SIGLEC9Q9Y336 463 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PN81 502 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PRD5 423 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PRF3 423 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PRM7 423 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 C11orf94C9JXX5 98 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 TIMM23O14925 209 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 FOXH1O75593 365 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 ACTL6BO94805 426 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 AREGP15514 252 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 CHRNA7P36544 502 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 LGALS4P56470 323 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 HABP2Q14520 560 aaPredicted RBP13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A087WWC5 75 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 TMEM250H0YL14 139 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 AGAP20933 346 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 RAB31Q13636 194 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 TNXAQ16473 311 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 TMEM249Q2WGJ8 235 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 SSX3Q99909 188 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 KCNIP2Q9NS61 270 aa13.03□□□□□ -0.32
SCNN1A-202ENST00000338748 FOLR2P14207 255 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 CD24P25063 80 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 MFAP2P55001 183 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 ATP5IP56385 69 aaPredicted RBP13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 GNB1P62873 340 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 TPTE2P1Q5T6R2 138 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 MIR17HGQ75NE6 70 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 FBXL15Q9H469 300 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 SPG11Q96JI7 2443 aa13.02□□□□□ -0.33
SCNN1A-202ENST00000338748 FCN1O00602 326 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 RAB5AP20339 215 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 CST9LP1Q5W188 147 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 OR11H6Q8NGC7 330 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 AMMECR1Q9Y4X0 333 aaPredicted RBP13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 FAM78BQ5VT40 261 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 CYP2G1PQ6ZSU1 146 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 MMD2Q8IY49 270 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 Q8WTZ3 238 aa13.01□□□□□ -0.33
SCNN1A-202ENST00000338748 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 ODF3BA8MYP8 253 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 M0R1W7 72 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 CXorf1O96002 111 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 CXCL1P09341 107 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 HTR1DP28221 377 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 RPL27AP46776 148 aaKnown RBP13□□□□□ -0.33
SCNN1A-202ENST00000338748 COMPP49747 757 aaPredicted RBP13□□□□□ -0.33
SCNN1A-202ENST00000338748 RHOBP62745 196 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 PNRC1Q12796 327 aaPredicted RBP13□□□□□ -0.33
SCNN1A-202ENST00000338748 ELOBQ15370 118 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 PPP1R27Q86WC6 154 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 YTHDF2Q9Y5A9 579 aaKnown RBP13□□□□□ -0.33
SCNN1A-202ENST00000338748 VENTXO95231 258 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 RNF224P0DH78 156 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 GCHFRP30047 84 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 ADIRFQ15847 76 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 RNF212Q495C1 297 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 CACNG8Q8WXS5 425 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 CFHR4Q92496 578 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 NAT8Q9UHE5 227 aa13□□□□□ -0.33
SCNN1A-202ENST00000338748 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 PRTN3P24158 256 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 GPX4P36969 197 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 AKR1D1P51857 326 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 MORN5Q5VZ52 161 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 LINC00518Q8N0U6 118 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 TMEM37Q8WXS4 190 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 SLC35E1Q96K37 410 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 DPM3Q9P2X0 92 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 DMRT1Q9Y5R6 373 aa12.99□□□□□ -0.33
SCNN1A-202ENST00000338748 TEX22C9J3V5 150 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 IGHV2-5P01817 119 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 MAS1LP35410 378 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 EFNA4P52798 201 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 LCN2P80188 198 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 ZNF90Q03938 601 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 VMO1Q7Z5L0 202 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 DYNAPQ8N1N2 210 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 RNASEH2CQ8TDP1 164 aaKnown RBP12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 ZNF503Q96F45 646 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 TGIF2-C20orf24A0A0A6YYL0 155 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 IGHV3-21A0A0B4J1V1 117 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 TMEM241Q24JQ0 296 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 FUT9Q9Y231 359 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms