RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RSG1Q9BU20 258 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 WNT10AQ9GZT5 417 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SRP14P37108 136 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 RAB14P61106 215 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CD69Q07108 199 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SUN5Q8TC36 379 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MISP3Q96FF7 219 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 DMRT1Q9Y5R6 373 aa11.64□□□□□ -0.55
CDK5RAP3-201ENST00000338399 RPS10-NUDT3A0A1W2PQS6 291 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 DEFA4P12838 97 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MDKP21741 143 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 OPRK1P41145 380 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 PVRIGQ6DKI7 326 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TMEM182Q6ZP80 229 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 C16orf82Q7Z2V1 217 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 OR5R1Q8NH85 324 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SMR3AQ99954 134 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 FNDC4Q9H6D8 234 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 M0QZK8 103 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CRYGCP07315 174 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 FAM157CP0CG43 387 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 AKR1C1Q04828 323 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 GAMTQ14353 236 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 PRDM13Q9H4Q3 707 aa11.63□□□□□ -0.55
CDK5RAP3-201ENST00000338399 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 HOXA3O43365 443 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 PRH1P02810 166 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 NMBP08949 121 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 GPX4P36969 197 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SULT1A2P50226 295 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 BLCAPP62952 87 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CLLU1Q5K131 121 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SLC16A13Q7RTY0 426 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SIGLECL1Q8N7X8 197 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 OR5T1Q8NG75 326 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 OR2T6Q8NHC8 308 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 RNF141Q8WVD5 230 aa11.62□□□□□ -0.55
CDK5RAP3-201ENST00000338399 IGHV3-21A0A0B4J1V1 117 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 FNDC10F2Z333 226 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CORTO00230 105 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CACNG8Q8WXS5 425 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SLC35E1Q96K37 410 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 NPCDR1Q9BY65 106 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 VPREB3Q9UKI3 123 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SONP18583 2426 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 G3V318 75 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 M6PRP20645 277 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TEPPQ6URK8 271 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ACY3Q96HD9 319 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MGST2Q99735 147 aa11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MPDU1O75352 247 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MT-CO2P00403 227 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 HNF1AP20823 631 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 Q6ZS46 218 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TMEM144Q7Z5S9 345 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ZNF709Q8N972 641 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 LINC00527Q9UJ94 153 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ANK3Q12955 4377 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-201ENST00000338399 LY6G6DO95868 133 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 IGHG2P01859 326 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 ETFRF1Q6IPR1 90 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CENPVQ7Z7K6 275 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 LRRC20Q8TCA0 184 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CXorf58Q96LI9 332 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 IGKV1OR2-108A0A075B7D4 117 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 C17orf112F2Z3M2 114 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 I3L2K1 104 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 AGPAT2O15120 278 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 FHITP49789 147 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 AKIRIN2Q53H80 203 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 NPIPB3Q92617 1050 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 248.5 ms