RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MRPL32Q9BYC8 188 aaKnown RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 VENTXO95231 258 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 RELBQ01201 579 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 TNFRSF14Q92956 283 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 PKIAP61925 76 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF672Q499Z4 452 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 GCSAMLQ5JQS6 135 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 NOL4LQ96MY1 436 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 MOSP00540 346 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 FCGR2BP31994 310 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 PAX9P55771 341 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 K7ENP7 123 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 FOXH1O75593 365 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 IGKV1-39P01597 117 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 IGKV1D-39P04432 117 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 FAM53AQ6NSI3 398 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 MRPL52Q86TS9 123 aaKnown RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 OR4A5Q8NH83 315 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 UNQ5815/PRO19632Q6UWF5 114 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 OR52E5Q8NH55 327 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 TRAV3A0A0B4J244 114 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 K7EM74 188 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 FXYD3Q14802 87 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 RNASEH2CQ8TDP1 164 aaKnown RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 PDLIM4P50479 330 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 RPL23P62829 140 aaKnown RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 TOMM20LQ6UXN7 152 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 OTOGLQ3ZCN5 2332 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 PCDH15Q96QU1 1955 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 MFAP2P55001 183 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 ICAM4Q14773 271 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 SLC25A48Q6ZT89 311 aaKnown RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 UTRNP46939 3433 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 IGKV3-7A0A075B6H7 116 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 TEX50A0A1B0GTY4 177 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 CACNG8Q8WXS5 425 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 GAFA1Q96PS6 74 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 PTPN13Q12923 2485 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 IGLV3-9A0A075B6K5 115 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 H3BTX0 84 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 S100A4P26447 101 aaKnown RBP5.19□□□□□ -1.58
PRKDC-202ENST00000338368 CCKARP32238 428 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 CD69Q07108 199 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 ECSCRQ19T08 205 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 MST1LQ2TV78 715 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 MIR17HGQ75NE6 70 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 LINC00518Q8N0U6 118 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 OR2D3Q8NGH3 330 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF257Q9Y2Q1 563 aa5.19□□□□□ -1.58
PRKDC-202ENST00000338368 IGKV1D-33P01593 117 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 IGKV1-33P01594 117 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 COL5A1P20908 1838 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-202ENST00000338368 A0A087WWC5 75 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 KRTAP27-1Q3LI81 207 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 C10orf55Q5SWW7 151 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 LYPD2Q6UXB3 125 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 LINC00305Q7Z4B0 112 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 NEUROG1Q92886 237 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 DMRTA2Q96SC8 542 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 CEACAM4O75871 244 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 NBEAP1P0C6P0 100 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 OR10W1Q8NGF6 305 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 SLC25A33Q9BSK2 321 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 CA7P43166 264 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 PRSS3P2Q8NHM4 247 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 WNT10AQ9GZT5 417 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 C1QTNF9BB2RNN3 333 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 CFHR2P36980 270 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 AMTP48728 403 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 SGK494Q96LW2 274 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 DCAF16Q9NXF7 216 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 CD24P25063 80 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 TMSB15BA0A087X1C1 80 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 SCO2A0A1W2PP80 73 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 RNASEKQ6P5S7 137 aaKnown RBP5.18□□□□□ -1.58
PRKDC-202ENST00000338368 DUX4L9Q6RFH8 374 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-202ENST00000338368 PPP1R27Q86WC6 154 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 PKIGQ9Y2B9 76 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 TRAV30A0A087WSZ9 112 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 BET1LQ9NYM9 111 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 IGHV1-8P0DP01 117 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 VAMP8Q9BV40 100 aa5.18□□□□□ -1.58
PRKDC-202ENST00000338368 NUTF2P61970 127 aaKnown RBP5.17□□□□□ -1.58
PRKDC-202ENST00000338368 LOC105371267A0A1B0GV96 52 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 MYOD1P15172 320 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 CDX1P47902 265 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-202ENST00000338368 TMEM167AQ8TBQ9 72 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 SFRP2Q96HF1 295 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
PRKDC-202ENST00000338368 MT-ND6P03923 174 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 GPX4P36969 197 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF383Q8NA42 475 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 TIMM23O14925 209 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 LCN2P80188 198 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 FA2HQ7L5A8 372 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 PRO1933Q9H354 126 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 AUP1Q9Y679 476 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 STAG3L2P0CL84 134 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms