RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 A0A1W2PQM1 296 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 TMEM14EPQ6UXP3 125 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
COL2A1-201ENST00000337299 ZC2HC1AQ96GY0 325 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 RCHY1Q96PM5 261 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 ZNF257Q9Y2Q1 563 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
COL2A1-201ENST00000337299 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 A0A1W2PR77 199 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 REG1AP05451 166 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 PYYP10082 97 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 MOB3BQ86TA1 216 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 PRDX2P32119 198 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 VMA21Q3ZAQ7 101 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 MOGAT3Q86VF5 341 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 GRAMD2BQ96HH9 432 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
COL2A1-201ENST00000337299 MOSP00540 346 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 STAG3L2P0CL84 134 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 KIR2DS2P43631 304 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 FXYD7P58549 80 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 RPL30P62888 115 aaKnown RBP11.07□□□□□ -0.64
COL2A1-201ENST00000337299 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 C5orf30Q96GV9 206 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 PRDM14Q9GZV8 571 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 A0A0G2JLM5 398 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 GOLT1AQ6ZVE7 132 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 SPAARA0A1B0GVQ0 90 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 LGALS4P56470 323 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 RPL11P62913 178 aaKnown RBP11.07□□□□□ -0.64
COL2A1-201ENST00000337299 LINC00479Q96M42 142 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 GGTLC1Q9BX51 225 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 RNF115Q9Y4L5 304 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 SPG11Q96JI7 2443 aa11.07□□□□□ -0.64
COL2A1-201ENST00000337299 PEX7O00628 323 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 CD24P25063 80 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 TWIST1Q15672 202 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 C20orf204Q6ZNR8 217 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 KLK15Q9H2R5 256 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 PPIAL4EA0A075B759 164 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 IGHV3-72A0A0B4J1Y9 119 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 PPIAL4FP0DN26 164 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 LMO1P25800 156 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 TRIP6Q15654 476 aaKnown RBP11.06□□□□□ -0.64
COL2A1-201ENST00000337299 FAM169BQ8N8A8 192 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 OR1L8Q8NGR8 309 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 J3KRW8 73 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 CLPSP04118 112 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 CX3CL1P78423 397 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 TRAV5A0A0B4J249 113 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 OR9G9P0C7N8 305 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 CACNG7P62955 275 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 DECR2Q9NUI1 292 aa11.06□□□□□ -0.64
COL2A1-201ENST00000337299 ANOS1P23352 680 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 PLXNA3P51805 1871 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 MBNL2Q5VZF2 373 aaKnown RBP11.05□□□□□ -0.64
COL2A1-201ENST00000337299 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 RFPL3SP0C7P2 107 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
COL2A1-201ENST00000337299 PAX2Q02962 417 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 MTURNQ8N3F0 131 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 FER1L6-AS1Q8NA97 138 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 OR13A1Q8NGR1 328 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 REPIN1Q9BWE0 567 aaKnown RBP11.05□□□□□ -0.64
COL2A1-201ENST00000337299 SAP30O75446 220 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 ESDP10768 282 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 MPV17P39210 176 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 PEAR1Q5VY43 1037 aaPredicted RBP11.05□□□□□ -0.64
COL2A1-201ENST00000337299 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 DNASE2BQ8WZ79 361 aa11.05□□□□□ -0.64
COL2A1-201ENST00000337299 NCOA6Q14686 2063 aaPredicted RBP11.05□□□□□ -0.64
COL2A1-201ENST00000337299 KLK10O43240 276 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 CLDN18P56856 261 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 CKS1BP61024 79 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 Q0VG73 95 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 CT55Q8WUE5 264 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 PKIBQ9C010 78 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 NOTCH2Q04721 2471 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 RNPS1Q15287 305 aaKnown RBP11.04□□□□□ -0.64
COL2A1-201ENST00000337299 GUSBP1Q15486 140 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 LRRC10Q5BKY1 277 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 TNFRSF19Q9NS68 423 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 THSD7BQ9C0I4 1608 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 TRGV5A0A0B4J1U4 118 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 OR9G1Q8NH87 305 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 SAP25Q8TEE9 199 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 WFDC12Q8WWY7 111 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 KLF13Q9Y2Y9 288 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms