RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TAS2R30P59541 319 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 S100A10P60903 97 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 RHOGP84095 191 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 LRRC37A5PQ49AS3 106 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 Q5BKY6 102 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 SLC25A24Q6NUK1 477 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 OR2T35Q8NGX2 323 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 CITED1Q99966 193 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 LY86O95711 162 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 IFNA10P01566 189 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 HIST1H1BP16401 226 aaKnown RBP13.58□□□□□ -0.24
CHGA-202ENST00000334654 NPY1RP25929 384 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 TPPP2P59282 170 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 TMEM65Q6PI78 240 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 NECAP1Q8NC96 275 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 OR1L6Q8NGR2 347 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
CHGA-202ENST00000334654 ZNF747Q9BV97 191 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 ZFP57Q9NU63 452 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 PSENENQ9NZ42 101 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 OR5AC2Q9NZP5 309 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 FBXL7Q9UJT9 491 aa13.58□□□□□ -0.24
CHGA-202ENST00000334654 G3V3Q6 166 aa13.57□□□□□ -0.24
CHGA-202ENST00000334654 H3BP45 60 aa13.57□□□□□ -0.24
CHGA-202ENST00000334654 K7EIM0 57 aa13.57□□□□□ -0.24
CHGA-202ENST00000334654 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHGA-202ENST00000334654 KRTAP21-3Q3LHN1 58 aa13.57□□□□□ -0.24
CHGA-202ENST00000334654 SPANXN5Q5MJ07 72 aa13.57□□□□□ -0.24
CHGA-202ENST00000334654 C18orf65Q6ZTR6 163 aa13.57□□□□□ -0.24
CHGA-202ENST00000334654 FNDC4Q9H6D8 234 aaPredicted RBP13.57□□□□□ -0.24
CHGA-202ENST00000334654 FAM223BA6NKX1 122 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 PMS2P5A8MQ11 134 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 I3L2K1 104 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 TSC22D2O75157 780 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
CHGA-202ENST00000334654 ATP5IP56385 69 aaPredicted RBP13.56□□□□□ -0.24
CHGA-202ENST00000334654 MLANAQ16655 118 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 TMEM14EPQ6UXP3 125 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 FAM223AQ8IWN6 122 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 GNB4Q9HAV0 340 aa13.56□□□□□ -0.24
CHGA-202ENST00000334654 TCRBV4S1A1TA0A5B7 111 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 HMSDA8MTL9 139 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 LYL1P12980 280 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 C4BPBP20851 252 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 RPL23AP62750 156 aaKnown RBP13.55□□□□□ -0.24
CHGA-202ENST00000334654 C15orf32Q32M92 178 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 C12orf54Q6X4T0 127 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 MISP3Q96FF7 219 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 USMG5Q96IX5 58 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 STRAPQ9Y3F4 350 aaKnown RBP13.55□□□□□ -0.24
CHGA-202ENST00000334654 FAM24AA6NFZ4 105 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 PRSS54Q6PEW0 395 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 RNASEH2CQ8TDP1 164 aaKnown RBP13.55□□□□□ -0.24
CHGA-202ENST00000334654 SCARB1Q8WTV0 552 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 THYN1Q9P016 225 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 TSSC4Q9Y5U2 329 aaPredicted RBP13.55□□□□□ -0.24
CHGA-202ENST00000334654 S4R3C0 116 aa13.55□□□□□ -0.24
CHGA-202ENST00000334654 IGHV3-21A0A0B4J1V1 117 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 A0A0G2JLM5 398 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 I3L521 148 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 L7N2F9 121 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 CYB5BO43169 146 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 MT-CO2P00403 227 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 IGHV3-11P01762 117 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 RLN2P04090 185 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 VAMP2P63027 116 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
CHGA-202ENST00000334654 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 ZNF343Q6P1L6 599 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 HAPLN4Q86UW8 402 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 LYRM2Q9NU23 88 aaPredicted RBP13.54□□□□□ -0.24
CHGA-202ENST00000334654 MRPL36Q9P0J6 103 aaKnown RBP13.54□□□□□ -0.24
CHGA-202ENST00000334654 MBD2Q9UBB5 411 aa13.54□□□□□ -0.24
CHGA-202ENST00000334654 IGSF23A1L1A6 192 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 E5RGE8 158 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
CHGA-202ENST00000334654 CORTO00230 105 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 IGHV3-48P01763 117 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 PET100P0DJ07 73 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 SLC25A4P12235 298 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 PVALBP20472 110 aaPredicted RBP13.53□□□□□ -0.24
CHGA-202ENST00000334654 ARL16Q0P5N6 197 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 ETV3LQ6ZN32 361 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 TMEM252Q8N6L7 170 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 C3orf56Q8N813 242 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 ZNF502Q8TBZ5 544 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 PINX1Q96BK5 328 aaKnown RBP13.53□□□□□ -0.24
CHGA-202ENST00000334654 CCDC140Q96MF4 163 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 VWFP04275 2813 aa13.53□□□□□ -0.24
CHGA-202ENST00000334654 SMLR1H3BR10 107 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 IFNA4P05014 189 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 METTL15P1P0C7V9 234 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 P2RY1P47900 373 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms