RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HLA-DRB4P13762 266 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 GUSBP11Q6P575 273 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 VSIRQ9H7M9 311 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 HLA-DRB4X5D2U9 266 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 NPIPB5A8MRT5 1133 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 NUP35Q8NFH5 326 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 TMEM54Q969K7 222 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 TMEM131Q92545 1883 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 MAST2Q6P0Q8 1798 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 DDB2Q92466 427 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 PTPRBP23467 1997 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 EFEMP2O95967 443 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 CELA2AP08217 269 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 MGPP08493 103 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 WNT2P09544 360 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 NBEAP1P0C6P0 100 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF260Q3ZCT1 412 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 Q6ZUT4 128 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 NABP1Q96AH0 204 aa5.17□□□□□ -1.58
CDC42BPA-201ENST00000334218 SNED1Q8TER0 1413 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 AMBPP02760 352 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 SLURP2P0DP57 97 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 REG1BP48304 166 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 NPIPB3Q92617 1050 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 OR11H7Q8NGC8 314 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 PPP1R3EQ9H7J1 279 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 PROP1O75360 226 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 GCHFRP30047 84 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF121P58317 390 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 MESP1Q9BRJ9 268 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 TINCRA0A1B0GVN0 87 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 CA11O75493 328 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 CST3P01034 146 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 ELAVL4P26378 380 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 NPIPB13A6NJU9 1138 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 NPIPB4C9JG80 1138 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF146Q15072 292 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 TMEM78Q5T7P6 136 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 CLEC4CQ8WTT0 213 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 MPZP25189 248 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 PSMB8P28062 276 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 TFPI2P48307 235 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 RPS23P62266 143 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 ODF1Q14990 250 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 K7ENP7 123 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM181AQ8N9Y4 354 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 WFDC9Q8NEX5 89 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 SRXN1Q9BYN0 137 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 TMSB15BA0A087X1C1 80 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 MUC21A0A0G2JKD1 596 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 MUC21A0A140T8X8 626 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 F2Z2F3 143 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 SS18L1O75177 396 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 TNXAQ16473 311 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 MUC21Q5SSG8 566 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM57AQ8TBR7 257 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 NABP2Q9BQ15 211 aa5.16□□□□□ -1.58
CDC42BPA-201ENST00000334218 GATA2P23769 480 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 ACTL10Q5JWF8 245 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 CD300LDQ6UXZ3 194 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 FBXL14Q8N1E6 418 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 DEFB123Q8N688 67 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 NEURL3Q96EH8 262 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 SNHG12Q9BXW3 62 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 PILRBQ9UKJ0 227 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 COL18A1P39060 1754 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 SERF1AO75920 110 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 COX6A1P12074 109 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM201AQ5SY85 155 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 Q6ZS52 159 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF329Q86UD4 541 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 SFTPA2Q8IWL1 248 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 SFTPA1Q8IWL2 248 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 OR51G1Q8NGK1 321 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 R4GMQ9 66 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 LOC730098B7Z3J9 87 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 CD59P13987 128 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 IGFBP2P18065 325 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 P2RY6Q15077 328 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 Q6ZVH6 145 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 TMEM254Q8TBM7 123 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 A0A1B0GUS0 222 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 PGFP49763 221 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 C1orf53Q5VUE5 145 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 NRGNQ92686 78 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 PELI2Q9HAT8 420 aa5.15□□□□□ -1.58
CDC42BPA-201ENST00000334218 PRSS46E5RG02 174 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 IAPPP10997 89 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 TNFRSF4P43489 277 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 LINC00643Q86TS7 51 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 GP6Q9HCN6 339 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 MRPS18BQ9Y676 258 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 IGKV6D-21A0A0A0MT36 114 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 IGHV2-26A0A0B4J1V2 119 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMX2-CTNND1H3BSU7 103 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 GZMMP51124 257 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 Q8NFD4 153 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A18PA6NE21 464 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms