RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZNF436Q9C0F3 470 aaPredicted RBP20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 BATF3Q9NR55 127 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 GAR1Q9NY12 217 aaKnown RBP20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 UFC1Q9Y3C8 167 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 ELLP55199 621 aaPredicted RBP20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 TM4SF20Q53R12 229 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 Q56UQ5 140 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 SPINK9Q5DT21 86 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 UBAC2Q8NBM4 344 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 UXS1Q8NBZ7 420 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 RBPMSQ93062 196 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 MARC2Q969Z3 335 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 KCNIP3Q9Y2W7 256 aa20.87■□□□□ 0.93
ATPAF1-201ENST00000329231 NAP1L6A6NFF2 107 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 INS-IGF2F8WCM5 200 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 IL7P13232 177 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 SNCAP37840 140 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 GALNT14Q96FL9 552 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 WWC2-AS2Q96NR7 200 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 C19orf73Q9NVV2 129 aa20.86■□□□□ 0.93
ATPAF1-201ENST00000329231 A0A0G2JRQ6 117 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 ZNF785A8K8V0 405 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 F8W735 103 aaPredicted RBP20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 I3L2K1 104 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 AKR1C4P17516 323 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 GUCA2BQ16661 112 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 SELENOHQ8IZQ5 122 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 TMEM190Q8WZ59 177 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 ENY2Q9NPA8 101 aa20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 MRPL27Q9P0M9 148 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-201ENST00000329231 NDUFA4O00483 81 aa20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 MFAP4P55083 255 aa20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 LHFPL5Q8TAF8 219 aa20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 TXN2Q99757 166 aa20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 CHRDL1Q9BU40 450 aa20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 PTTG2Q9NZH5 202 aa20.84■□□□□ 0.93
ATPAF1-201ENST00000329231 MT-CO2P00403 227 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 C8orf88P0DMB2 117 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 FCGR2BP31994 310 aaPredicted RBP20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 HOXA1P49639 335 aaPredicted RBP20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 SUB1P53999 127 aaKnown RBP eCLIP20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 CD81P60033 236 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 TMEM268Q5VZI3 342 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 Q6ZRM9 215 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 TMED4Q7Z7H5 227 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 PINX1Q96BK5 328 aaKnown RBP20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 C7orf50Q9BRJ6 194 aaKnown RBP20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 TUBA4BQ9H853 241 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 MLXQ9UH92 298 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 TMEM56-RWDD3S4R434 201 aa20.83■□□□□ 0.93
ATPAF1-201ENST00000329231 NUPL2O15504 423 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 ADMP35318 185 aa20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 SUPT4H1P63272 117 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 TMEM187Q14656 261 aa20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 RBMS2Q15434 407 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 IL22RA2Q969J5 263 aa20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 WDR89Q96FK6 387 aaPredicted RBP20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 NEURL2Q9BR09 285 aa20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 ZMAT4Q9H898 229 aa20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 DAZ1Q9NQZ3 744 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-201ENST00000329231 LINC00854A0A1B0GVQ3 168 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 CENPXA8MT69 81 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 CTSGP08311 255 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 ANXA3P12429 323 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 SPCS3P61009 180 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 RELQ04864 619 aaPredicted RBP20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 AARDQ4LEZ3 155 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 BTNL8Q6UX41 500 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 TMEM61Q8N0U2 210 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 OR52E5Q8NH55 327 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 S100ZQ8WXG8 99 aa20.81■□□□□ 0.92
ATPAF1-201ENST00000329231 CCR6P51684 374 aa20.8■□□□□ 0.92
ATPAF1-201ENST00000329231 TMEM128Q5BJH2 165 aa20.8■□□□□ 0.92
ATPAF1-201ENST00000329231 CORTO00230 105 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 SRPXP78539 464 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 GPR146Q96CH1 333 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 C20orf24Q9BUV8 137 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 CCDC32Q9BV29 185 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 CACNG5Q9UF02 275 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 SELENOKQ9Y6D0 94 aa20.79■□□□□ 0.92
ATPAF1-201ENST00000329231 TRAV25A0A0B4J276 109 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 NDUFB6O95139 128 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 CD7P09564 240 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 RNASE2P10153 161 aaKnown RBP20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 PVRIGQ6DKI7 326 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 RBPMS2Q6ZRY4 209 aaKnown RBP20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 CENPSQ8N2Z9 138 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 RCHY1Q96PM5 261 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 CACFD1Q9UGQ2 172 aa20.78■□□□□ 0.92
ATPAF1-201ENST00000329231 K7EMT4 169 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 GNG7O60262 68 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 IGHV3-48P01763 117 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 NPBWR1P48145 328 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 SLC16A13Q7RTY0 426 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 DUSP18Q8NEJ0 188 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 PRR13Q9NZ81 148 aa20.77■□□□□ 0.92
ATPAF1-201ENST00000329231 PIGBOS1A0A0B4J2F0 54 aa20.76■□□□□ 0.91
ATPAF1-201ENST00000329231 C15orf62A8K5M9 175 aa20.76■□□□□ 0.91
ATPAF1-201ENST00000329231 SCAF4O95104 1147 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms