RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 TMIGD2Q96BF3 282 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 C12orf43Q96C57 262 aaKnown RBP1.99□□□□□ -2.09
SKP1-201ENST00000328392 RBP7Q96R05 134 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 YIPF3Q9GZM5 350 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 OR51V1Q9H2C8 321 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 TXNIPQ9H3M7 391 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 PARP11Q9NR21 331 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 PAQR5Q9NXK6 330 aaPredicted RBP1.99□□□□□ -2.09
SKP1-201ENST00000328392 BABAM2Q9NXR7 383 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 MED11Q9P086 117 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 ENPP5Q9UJA9 477 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 ZNF391Q9UJN7 358 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 DKKL1Q9UK85 242 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 SSR3Q9UNL2 185 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 IER3IP1Q9Y5U9 82 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 NBASA2RRP1 2371 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 KMT2EQ8IZD2 1858 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 PTPRQQ9UMZ3 2332 aa1.99□□□□□ -2.09
SKP1-201ENST00000328392 POLEQ07864 2286 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZNF292O60281 2723 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 EML6Q6ZMW3 1958 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 EXPH5Q8NEV8 1989 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 SPTBN4Q9H254 2564 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 TRAV17A0A0B4J275 112 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 LOC100506127A0A0U1RQW1 187 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 SPAARA0A1B0GVQ0 90 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 A0A1B0GW15 77 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 TRDV1A0A1B0GX56 115 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 A0A1W2PQL4 384 aaPredicted RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 RBFOX3A6NFN3 312 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 FAM183AA6NL82 134 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 TMEM212A6NML5 194 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZNF879B4DU55 563 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 FTCDNL1E5RQL4 147 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZNF670-ZNF695F2Z2N8 137 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 H3BP45 60 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 J3QRE1 110 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 M0R129 80 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 GPR171O14626 319 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 TCAPO15273 167 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 COX7A2P2O60397 106 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ARL6IP5O75915 188 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 LIMS3P0CW19 117 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 LIMS4P0CW20 117 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 CCL3P10147 92 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 SPI1P17947 270 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 CFL1P23528 166 aaKnown RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 GRPRP30550 384 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 PYCR1P32322 319 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 S100A5P33763 92 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 PSMD7P51665 324 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 OR2B6P58173 313 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 H3F3AP84243 136 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 MEF2CQ06413 473 aaPredicted RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 FOXF1Q12946 379 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 GUSBP1Q15486 140 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 BCL2A1Q16548 175 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 MOGQ16653 247 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZNF404Q494X3 552 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 LDLRAD2Q5SZI1 272 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZNF660Q6AZW8 331 aaPredicted RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 RPL22L1Q6P5R6 122 aaKnown RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 CD200R1LQ6Q8B3 271 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ATP6V1C2Q8NEY4 427 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 OR6K3Q8NGY3 331 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 PSMF1Q92530 271 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 AP3S1Q92572 193 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 SLC25A44Q96H78 314 aaPredicted RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 FMC1Q96HJ9 113 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ARL5BQ96KC2 179 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 Q96M85 177 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 KCTD7Q96MP8 289 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 NMNAT3Q96T66 252 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ANAPC13Q9BS18 74 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 MED18Q9BUE0 208 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 MROQ9BYG7 248 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZNF436Q9C0F3 470 aaPredicted RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 DCSTAMPQ9H295 470 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 SYT4Q9H2B2 425 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 ASCL3Q9NQ33 180 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 NDUFB11Q9NX14 153 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 RBM12B-AS1Q9P1G2 102 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 CLEC2DQ9UHP7 191 aa1.98□□□□□ -2.09
SKP1-201ENST00000328392 LSM2Q9Y333 95 aaKnown RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 SPTBN1Q01082 2364 aaKnown RBP1.98□□□□□ -2.09
SKP1-201ENST00000328392 ZGRF1Q86YA3 2104 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 WDFY4Q6ZS81 3184 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 TRAV1-2A0A0B4J238 106 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 METTL15A6NJ78 407 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 CLDN25C9JDP6 229 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 C9JQL5 133 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 LRRN3E7EW58 273 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 J3QLW9 94 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 ZNF593O00488 134 aaPredicted RBP1.97□□□□□ -2.09
SKP1-201ENST00000328392 ISLRO14498 428 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 PDCD5O14737 125 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 GATCO43716 136 aaKnown RBP1.97□□□□□ -2.09
SKP1-201ENST00000328392 APOC1P02654 83 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 TRGV3P03979 118 aa1.97□□□□□ -2.09
SKP1-201ENST00000328392 GYPBP06028 91 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms