RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 GPHA2Q96T91 129 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 A1L4Q6 167 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 FAM159AQ6UWV7 190 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 GAFA1Q96PS6 74 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 IGKV1-27A0A075B6S5 117 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 RNF222A6NCQ9 220 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 FABP2P12104 132 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 IGFBP2P18065 325 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 CKS2P33552 79 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 LEPP41159 167 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 Q6P435 159 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 PRSS33Q8NF86 280 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
COL4A5-201ENST00000328300 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 SMAD7O15105 426 aaKnown RBP9.47□□□□□ -0.89
COL4A5-201ENST00000328300 PLAUP00749 431 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 A0A087WWC5 75 aa9.46□□□□□ -0.89
COL4A5-201ENST00000328300 A0A1B0GV90 55 aa9.46□□□□□ -0.89
COL4A5-201ENST00000328300 FNDC10F2Z333 226 aa9.46□□□□□ -0.89
COL4A5-201ENST00000328300 PEX7O00628 323 aa9.46□□□□□ -0.89
COL4A5-201ENST00000328300 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 TDGF1P13385 188 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 EFNB3Q15768 340 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 UQCRFS1P47985 274 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 TFPI2P48307 235 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 REC114Q7Z4M0 266 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 SSC4DQ8WTU2 575 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 J3KRW8 73 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 CD177Q8N6Q3 437 aa9.46□□□□□ -0.9
COL4A5-201ENST00000328300 ARID1AO14497 2285 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 ADIPOQQ15848 244 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 TMEM200BQ69YZ2 307 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 GOLT1AQ6ZVE7 132 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 TRAV14DV4A0A0A6YYC5 116 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 RNF224P0DH78 156 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 PROK2Q9HC23 129 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 CD55P08174 381 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 ASIPP42127 132 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 HBBP68871 147 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 PRSS8Q16651 343 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 LEMD1Q68G75 181 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 GBF1Q92538 1859 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 CENPWQ5EE01 88 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 IGFL2Q6UWQ7 119 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 ASCL2Q99929 193 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 E9PQ18 207 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 TIMM23O14925 209 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 TMEM70Q9BUB7 260 aa9.45□□□□□ -0.9
COL4A5-201ENST00000328300 CEP290O15078 2479 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 UBE2L6O14933 153 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 LMO1P25800 156 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 GPR183P32249 361 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-201ENST00000328300 RNF138Q8WVD3 245 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 IGHV3OR16-10A0A075B7F0 116 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 A0A0B4J293 547 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 DPRXA6NFQ7 191 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 M0R3E3 92 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 SRSF4Q08170 494 aaKnown RBP9.44□□□□□ -0.9
COL4A5-201ENST00000328300 LY6G6FQ5SQ64 297 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 VOPP1Q96AW1 172 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 RNF125Q96EQ8 232 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 RARRES2Q99969 163 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
COL4A5-201ENST00000328300 ZNF256Q9Y2P7 627 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-201ENST00000328300 SOD3P08294 240 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 TCTAP57738 103 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 TFF3Q07654 80 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 CEACAM4O75871 244 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 ICAM4Q14773 271 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 VMO1Q7Z5L0 202 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 RNF126Q9BV68 326 aa9.44□□□□□ -0.9
COL4A5-201ENST00000328300 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 A6NJY4 79 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 HTN1P15515 57 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 Q5BKY6 102 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 LINC01356Q8N9X3 169 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 BEND2Q8NDZ0 799 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 AMMECR1LQ6DCA0 310 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 ZNF841Q6ZN19 808 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 ANAPC1Q9H1A4 1944 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 SRP19P09132 144 aaKnown RBP9.43□□□□□ -0.9
COL4A5-201ENST00000328300 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 OVOL1O14753 267 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
COL4A5-201ENST00000328300 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
COL4A5-201ENST00000328300 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms