RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 NPBQ8NG41 125 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 OR2T6Q8NHC8 308 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 EAF1Q96JC9 268 aaPredicted RBP11.94□□□□□ -0.5
TPM3-205ENST00000328159 POLR3KQ9Y2Y1 108 aaPredicted RBP11.94□□□□□ -0.5
TPM3-205ENST00000328159 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 M0R036 132 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 TSPAN4O14817 238 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
TPM3-205ENST00000328159 AREGP15514 252 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
TPM3-205ENST00000328159 PSMB3P49720 205 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 UBE2E1P51965 193 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 SSBP2P81877 361 aaPredicted RBP11.93□□□□□ -0.5
TPM3-205ENST00000328159 TMEM249Q2WGJ8 235 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 CBLN2Q8IUK8 224 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 IQCF2Q8IXL9 164 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 ACY3Q96HD9 319 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 FNDC4Q9H6D8 234 aaPredicted RBP11.93□□□□□ -0.5
TPM3-205ENST00000328159 MANBALQ9NQG1 85 aa11.93□□□□□ -0.5
TPM3-205ENST00000328159 TBL2Q9Y4P3 447 aaKnown RBP11.93□□□□□ -0.5
TPM3-205ENST00000328159 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 NDUFA3O95167 84 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 CD24P25063 80 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 HES1Q14469 280 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 C17orf50Q8WW18 174 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
TPM3-205ENST00000328159 LPAR2Q9HBW0 351 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 PUS1Q9Y606 427 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM3-205ENST00000328159 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 IGHV4-61A0A0C4DH41 118 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 APELAP0DMC3 54 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 COX6B1P14854 86 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 MFAP2P55001 183 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 RHOBP62745 196 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
TPM3-205ENST00000328159 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
TPM3-205ENST00000328159 C7orf77A4D0Y5 90 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 H3BQ15 152 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 STAG3L2P0CL84 134 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 STAG3L3P0CL85 134 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 FBLN7Q53RD9 439 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 FAM90A2PQ658T7 463 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 MISP3Q96FF7 219 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 SRSF8Q9BRL6 282 aaKnown RBP11.91□□□□□ -0.5
TPM3-205ENST00000328159 RPS10P5Q9NQ39 176 aa11.91□□□□□ -0.5
TPM3-205ENST00000328159 ABCA2Q9BZC7 2435 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 PAGE4O60829 102 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 CNIH1O95406 144 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 CRYGCP07315 174 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 CD81P60033 236 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 EBI3Q14213 229 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 RHEBQ15382 184 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 SPATA31B1PQ5VZV4 182 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 MALSU1Q96EH3 234 aa11.9□□□□□ -0.5
TPM3-205ENST00000328159 F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
TPM3-205ENST00000328159 CXorf1O96002 111 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 ARL14EPLP0DKL9 152 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.51
TPM3-205ENST00000328159 AKR1C3P42330 323 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 C5orf64Q2M2E5 130 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 C19orf35Q6ZS72 473 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 Q8N6K4 173 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 THAP8Q8NA92 274 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 NPIPB3Q92617 1050 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 PERPQ96FX8 193 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 AJUBAQ96IF1 538 aa11.9□□□□□ -0.51
TPM3-205ENST00000328159 SEPSECSQ9HD40 501 aaKnown RBP11.9□□□□□ -0.51
TPM3-205ENST00000328159 IGHV4-30-2A0A087WSY4 118 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 CORTO00230 105 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 NDUFS6O75380 124 aaKnown RBP11.89□□□□□ -0.51
TPM3-205ENST00000328159 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 RND2P52198 227 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 PAX8Q06710 450 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 SPNS3Q6ZMD2 512 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 TVP23CQ96ET8 276 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 NIPSNAP3BQ9BS92 247 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
TPM3-205ENST00000328159 MRPL36Q9P0J6 103 aaKnown RBP11.89□□□□□ -0.51
TPM3-205ENST00000328159 A1L4Q6 167 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 SAA4P35542 130 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 FXYD3Q14802 87 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 OR4F5Q8NH21 305 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 NRGNQ92686 78 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 OR4F4Q96R69 305 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 FUT9Q9Y231 359 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 TACC2O95359 2948 aa11.88□□□□□ -0.51
TPM3-205ENST00000328159 IGKV1D-37A0A075B6S9 117 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 TCRBV4S1A1TA0A5B7 111 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 TMEM250H0YL14 139 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms