RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CELA3AP09093 270 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 HIST1H1AQ02539 215 aaPredicted RBP10.45□□□□□ -0.74
CCDC60-201ENST00000327554 ZNF841Q6ZN19 808 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 CXorf67Q86X51 503 aaPredicted RBP10.45□□□□□ -0.74
CCDC60-201ENST00000327554 PEF1Q9UBV8 284 aaKnown RBP10.45□□□□□ -0.74
CCDC60-201ENST00000327554 PI4KAP42356 2102 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 FOXE3Q13461 319 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 GABRA6Q16445 453 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 RTL8BQ17RB0 113 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 ACP7Q6ZNF0 438 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 FAM90A1Q86YD7 464 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 SMRP1Q8NCR6 262 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 PRR7Q8TB68 274 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 TMEM191AQ9H0A3 160 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 TMEM265A0A087WTH1 108 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 SPINT2O43291 252 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 CIDEAO60543 219 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 TNFSF15O95150 251 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 TAS2R45P59539 299 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 IL11RAQ14626 422 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 C7orf69Q9H7B7 122 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 IDI2-AS1Q9NZ38 188 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 LOXL2Q9Y4K0 774 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 LEPROTL1O95214 131 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 C8orf88P0DMB2 117 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 MYOD1P15172 320 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 HSPE1P61604 102 aaKnown RBP10.44□□□□□ -0.74
CCDC60-201ENST00000327554 FAM162BQ5T6X4 162 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 MORN5Q5VZ52 161 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 SSX8Q7RTT4 187 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 FER1L6-AS1Q8NA97 138 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 DDB2Q92466 427 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
CCDC60-201ENST00000327554 FAM167A-AS1Q96KT0 104 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 S1PR3Q99500 378 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 TMEM14BQ9NUH8 114 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 FOXA2Q9Y261 457 aaPredicted RBP10.44□□□□□ -0.74
CCDC60-201ENST00000327554 FREM2Q5SZK8 3169 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 PCSK5Q92824 1860 aa10.44□□□□□ -0.74
CCDC60-201ENST00000327554 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 C1orf229Q6ZS94 237 aaPredicted RBP10.43□□□□□ -0.74
CCDC60-201ENST00000327554 C2orf91Q6ZV80 131 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 C7orf71A4D174 169 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 IQCF6A8MYZ5 107 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 CD24P25063 80 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 GPR183P32249 361 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 FOLR3P41439 243 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 FOXA3P55318 350 aaPredicted RBP10.43□□□□□ -0.74
CCDC60-201ENST00000327554 TBC1D28Q2M2D7 210 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 RNFT1Q5M7Z0 435 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 TRAT1Q6PIZ9 186 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 SLC25A2Q9BXI2 301 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 AMMECR1Q9Y4X0 333 aaPredicted RBP10.43□□□□□ -0.74
CCDC60-201ENST00000327554 DNAJC13O75165 2243 aa10.43□□□□□ -0.74
CCDC60-201ENST00000327554 TRAV5A0A0B4J249 113 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 ZNF134P52741 427 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 TCF24Q7RTU0 167 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 OR1B1Q8NGR6 318 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 MCRIP2Q9BUT9 160 aaKnown RBP10.42□□□□□ -0.74
CCDC60-201ENST00000327554 C19orf24Q9BVV8 132 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 IFI27L2Q9H2X8 130 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 GNG12Q9UBI6 72 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 COL6A3P12111 3177 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 G3V4G9 280 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 J3QW42 95 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 CCL4P13236 92 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 CYB561P49447 251 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 UBE2L3P68036 154 aaKnown RBP10.42□□□□□ -0.74
CCDC60-201ENST00000327554 PPP1R32Q7Z5V6 425 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 LHFPL4Q7Z7J7 247 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 ENY2Q9NPA8 101 aa10.42□□□□□ -0.74
CCDC60-201ENST00000327554 PSMB11A5LHX3 300 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 PEX7O00628 323 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 IGHV3-7P01780 117 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 SP9P0CG40 484 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 OR4S2Q8NH73 311 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 OR9G1Q8NH87 305 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 CHRDL1Q9BU40 450 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 DUSP23Q9BVJ7 150 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 C12orf49Q9H741 205 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 BOKQ9UMX3 212 aaPredicted RBP10.41□□□□□ -0.74
CCDC60-201ENST00000327554 PRUNE2Q8WUY3 3088 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 GAGE10A6NGK3 116 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 HIST1H1EP10412 219 aaKnown RBP10.41□□□□□ -0.74
CCDC60-201ENST00000327554 KIR2DS2P43631 304 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 ARF6P62330 175 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 HBBP68871 147 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 PAX2Q02962 417 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 EDDM3AQ14507 147 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 SMIM21Q3B7S5 101 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 SPINK14Q6IE38 97 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms