RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 SEMA5BQ9P283 1151 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 RNF115Q9Y4L5 304 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 UQCRFS1P47985 274 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 UNQ5815/PRO19632Q6UWF5 114 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 DCAF16Q9NXF7 216 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 C14orf144Q96I85 54 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 DMRT1Q9Y5R6 373 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 IGKV3D-15A0A087WSY6 115 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 TRAV5A0A0B4J249 113 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 A8MWL6 223 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 IGKV3-15P01624 115 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 MGPP08493 103 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 CHODLQ9H9P2 273 aa13.72□□□□□ -0.21
CLIP4-201ENST00000320081 ZNF729A6NN14 1252 aaPredicted RBP13.71□□□□□ -0.21
CLIP4-201ENST00000320081 PF4V1P10720 104 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 NMUP48645 174 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 NMSQ5H8A3 153 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 FAM90A1Q86YD7 464 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 IGKV3-20P01619 116 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
CLIP4-201ENST00000320081 MC5RP33032 325 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.21
CLIP4-201ENST00000320081 CDKN1AP38936 164 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 ZNF841Q6ZN19 808 aa13.71□□□□□ -0.21
CLIP4-201ENST00000320081 IFNL4K9M1U5 179 aa13.71□□□□□ -0.22
CLIP4-201ENST00000320081 ISLRO14498 428 aa13.71□□□□□ -0.22
CLIP4-201ENST00000320081 LCN2P80188 198 aa13.71□□□□□ -0.22
CLIP4-201ENST00000320081 TCF21O43680 179 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 KCNS1Q96KK3 526 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 BET1LQ9NYM9 111 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 MLNRO43193 412 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 XIRP2A4UGR9 3374 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 NAV3Q8IVL0 2385 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 SFXN3Q9BWM7 321 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 TMEM191AQ9H0A3 160 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 GSX1Q9H4S2 264 aaPredicted RBP13.7□□□□□ -0.22
CLIP4-201ENST00000320081 LINC00527Q9UJ94 153 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
CLIP4-201ENST00000320081 NBEAP1P0C6P0 100 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 TWIST1Q15672 202 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 NRN1LQ496H8 165 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 MBNL2Q5VZF2 373 aaKnown RBP13.7□□□□□ -0.22
CLIP4-201ENST00000320081 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
CLIP4-201ENST00000320081 CHD7Q9P2D1 2997 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 MPZP25189 248 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 BPIFA4PQ86YQ2 179 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 CD177Q8N6Q3 437 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 OCC1Q8TAD7 63 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
CLIP4-201ENST00000320081 C1RLQ9NZP8 487 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 C5orf52A6NGY3 159 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 SELENOTP62341 195 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 FAM162BQ5T6X4 162 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 IFI27L2Q9H2X8 130 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
CLIP4-201ENST00000320081 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 C17orf100A8MU93 164 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 MAS1LP35410 378 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 SRP14P37108 136 aaKnown RBP13.69□□□□□ -0.22
CLIP4-201ENST00000320081 SPATA45Q537H7 98 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 SPANXN1Q5VSR9 72 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 PLXNA2O75051 1894 aa13.69□□□□□ -0.22
CLIP4-201ENST00000320081 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.68□□□□□ -0.22
CLIP4-201ENST00000320081 MST1LQ2TV78 715 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 COQ2Q96H96 371 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 ASCL2Q99929 193 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 CORTO00230 105 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 RIGQ13278 110 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 ZNF146Q15072 292 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 TMEM42Q69YG0 159 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 CLEC7AQ9BXN2 247 aa13.68□□□□□ -0.22
CLIP4-201ENST00000320081 BTF3P20290 206 aaKnown RBP13.67□□□□□ -0.22
CLIP4-201ENST00000320081 PPOXP50336 477 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 KLF17Q5JT82 389 aaPredicted RBP13.67□□□□□ -0.22
CLIP4-201ENST00000320081 MAP1LC3CQ9BXW4 147 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.67□□□□□ -0.22
CLIP4-201ENST00000320081 RPL24P83731 157 aaKnown RBP13.67□□□□□ -0.22
CLIP4-201ENST00000320081 IGKV1D-33P01593 117 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 IGKV1-33P01594 117 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 LOXL3P58215 753 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 C18orf15Q96N68 181 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 MED12LQ86YW9 2145 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 A1L4Q6 167 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 RPL7P18124 248 aaKnown RBP13.67□□□□□ -0.22
CLIP4-201ENST00000320081 TCF24Q7RTU0 167 aa13.67□□□□□ -0.22
CLIP4-201ENST00000320081 UBE2CO00762 179 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 LEPROTL1O95214 131 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 IGHV1-46P01743 117 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 HOXA5P20719 270 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 CTAG1AP78358 180 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 ASPHD1Q5U4P2 390 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 DUX4L9Q6RFH8 374 aaPredicted RBP13.66□□□□□ -0.22
CLIP4-201ENST00000320081 TMEM183AQ8IXX5 376 aa13.66□□□□□ -0.22
CLIP4-201ENST00000320081 LRTM2Q8N967 370 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 564.7 ms